RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 FGFBP2Q9BYJ0 223 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 SEMA6BQ9H3T3 888 aa20.15■□□□□ 0.82
SMC4-211ENST00000469858 CCL15-CCL14A0A0B4J2E2 113 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 CCNE2O96020 404 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 GTF2A2P52657 109 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 FSTL1Q12841 308 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 KRT31Q15323 416 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 STXBP2Q15833 593 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 CCL15Q16663 113 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 TCP11X2Q5H9J9 407 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 MYOCDQ8IZQ8 938 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 ANKRD20A12PQ8NF67 263 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 CACTINQ8WUQ7 758 aaKnown RBP20.14■□□□□ 0.81
SMC4-211ENST00000469858 MS4A4AQ96JQ5 239 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 ZSWIM4Q9H7M6 989 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 PCDHA2Q9Y5H9 948 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 WDR64B1ANS9 1081 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 RSPH10B2B2RC85 870 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 RSPH10BP0C881 870 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 KCNA2P16389 499 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 COPB2P35606 906 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 JAK3P52333 1124 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 CENPPQ6IPU0 288 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 SMCR8Q8TEV9 937 aaPredicted RBP20.14■□□□□ 0.81
SMC4-211ENST00000469858 EEF2KMTQ96G04 330 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 CDHR1Q96JP9 859 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 THAP9Q9H5L6 903 aa20.14■□□□□ 0.81
SMC4-211ENST00000469858 ADD3Q9UEY8 706 aaKnown RBP20.14■□□□□ 0.81
SMC4-211ENST00000469858 LIMA1Q9UHB6 759 aaKnown RBP20.14■□□□□ 0.81
SMC4-211ENST00000469858 MYH11P35749 1972 aa20.13■□□□□ 0.81
SMC4-211ENST00000469858 PDHXO00330 501 aa20.13■□□□□ 0.81
SMC4-211ENST00000469858 TBCAO75347 108 aaKnown RBP20.13■□□□□ 0.81
SMC4-211ENST00000469858 SFNP31947 248 aa20.13■□□□□ 0.81
SMC4-211ENST00000469858 QARSP47897 775 aaKnown RBP20.13■□□□□ 0.81
SMC4-211ENST00000469858 GSDMDP57764 484 aa20.13■□□□□ 0.81
SMC4-211ENST00000469858 NR1I3Q14994 352 aa20.13■□□□□ 0.81
SMC4-211ENST00000469858 FILIP1LQ4L180 1135 aa20.13■□□□□ 0.81
SMC4-211ENST00000469858 WDR78Q5VTH9 848 aa20.13■□□□□ 0.81
SMC4-211ENST00000469858 SFR1Q86XK3 245 aa20.13■□□□□ 0.81
SMC4-211ENST00000469858 IRF2BP1Q8IU81 584 aa20.13■□□□□ 0.81
SMC4-211ENST00000469858 NOC3LQ8WTT2 800 aaKnown RBP20.13■□□□□ 0.81
SMC4-211ENST00000469858 POLD4Q9HCU8 107 aa20.13■□□□□ 0.81
SMC4-211ENST00000469858 RTN4Q9NQC3 1192 aaKnown RBP20.13■□□□□ 0.81
SMC4-211ENST00000469858 ZNFX1Q9P2E3 1918 aaKnown RBP20.13■□□□□ 0.81
SMC4-211ENST00000469858 TRPM7Q96QT4 1865 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 SOWAHBA6NEL2 793 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 BTBD19C9JJ37 291 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 ERVK-9P63128 1117 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 ERVK-24P63145 666 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 C1orf186Q6ZWK4 172 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 LRRC8AQ8IWT6 810 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 FAM133AQ8N9E0 248 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 TAB2Q9NYJ8 693 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 LRRC37A2A6NM11 1700 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 ARHGEF35A5YM69 484 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 TEX33O43247 280 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 EIF3JO75822 258 aaKnown RBP20.12■□□□□ 0.81
SMC4-211ENST00000469858 UGCGQ16739 394 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 ZNF746Q6NUN9 644 aaPredicted RBP20.12■□□□□ 0.81
SMC4-211ENST00000469858 BRI3BPQ8WY22 251 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 BCAS3Q9H6U6 928 aa20.12■□□□□ 0.81
SMC4-211ENST00000469858 MAGEC2Q9UBF1 373 aaPredicted RBP20.12■□□□□ 0.81
SMC4-211ENST00000469858 SPATA31C2B4DYI2 1134 aa20.11■□□□□ 0.81
SMC4-211ENST00000469858 PGK2P07205 417 aa20.11■□□□□ 0.81
SMC4-211ENST00000469858 COPB1P53618 953 aaKnown RBP20.11■□□□□ 0.81
SMC4-211ENST00000469858 KCTD2Q14681 263 aa20.11■□□□□ 0.81
SMC4-211ENST00000469858 SPRYD7Q5W111 196 aa20.11■□□□□ 0.81
SMC4-211ENST00000469858 MMP19Q99542 508 aa20.11■□□□□ 0.81
SMC4-211ENST00000469858 VPS16Q9H269 839 aa20.11■□□□□ 0.81
SMC4-211ENST00000469858 JPH1Q9HDC5 661 aaPredicted RBP20.11■□□□□ 0.81
SMC4-211ENST00000469858 PYCARDQ9ULZ3 195 aa20.11■□□□□ 0.81
SMC4-211ENST00000469858 COL4A3BPQ9Y5P4 624 aa20.11■□□□□ 0.81
SMC4-211ENST00000469858 N4BP3O15049 544 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 SORBS3O60504 671 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 FAM13AO94988 1023 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 EEF1GP26641 437 aaKnown RBP20.1■□□□□ 0.81
SMC4-211ENST00000469858 SP4Q02446 784 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 CST9Q5W186 159 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 SEPT14Q6ZU15 432 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 NELFCDQ8IXH7 590 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 GTF3C2Q8WUA4 911 aaPredicted RBP20.1■□□□□ 0.81
SMC4-211ENST00000469858 NFASCO94856 1347 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 LRRC10BA6NIK2 292 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 SFI1A8K8P3 1242 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 CASP5P51878 434 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 PSMC5P62195 406 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 LRRC63Q05C16 580 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 SPECC1LQ69YQ0 1117 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.1■□□□□ 0.811e-6■■■■■ 406.9
SMC4-211ENST00000469858 RDM1Q8NG50 284 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 SCFD1Q8WVM8 642 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 TSG101Q99816 390 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 SENP7Q9BQF6 1050 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 MROH8Q9H579 483 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 SLC9A2Q9UBY0 812 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 SLC45A1Q9Y2W3 748 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 PCDHA10Q9Y5I2 948 aa20.1■□□□□ 0.81
SMC4-211ENST00000469858 KIF20AO95235 890 aa20.09■□□□□ 0.81
SMC4-211ENST00000469858 LYPLA2O95372 231 aa20.09■□□□□ 0.81
SMC4-211ENST00000469858 EDNRBP24530 442 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 819.2 ms