RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 SLC35G1Q2M3R5 365 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 CCDC70Q6NSX1 233 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 RIN2Q8WYP3 895 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 HOXC10Q9NYD6 342 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 MAP3K20Q9NYL2 800 aaKnown RBP11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 ADD3Q9UEY8 706 aaKnown RBP11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 PNMA3Q9UL41 463 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 EIF3CLB5ME19 914 aaKnown RBP11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 RNF225M0QZC1 329 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 CYTH3O43739 400 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 MFAP3LO75121 409 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 GYPCP04921 128 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 DSG3P32926 999 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 ABL2P42684 1182 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 SNAP25P60880 206 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 REM2Q8IYK8 340 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 ATG4CQ96DT6 458 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 EIF3CQ99613 913 aaKnown RBP11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 PCDHB6Q9Y5E3 794 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 CTAGE9A4FU28 777 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 POTEB2H3BUK9 544 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 ARHGAP25P42331 645 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 CXorf56Q9H5V9 222 aa11.04□□□□□ -0.64
SEMA4D-215ENST00000469653 A0A087X0B3 334 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 ERLIN1O75477 346 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 EIF3JO75822 258 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 PAX7P23759 505 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 HERVK_113P62684 666 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 ERVK-24P63145 666 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 UHMK1Q8TAS1 419 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 SPZ1Q9BXG8 430 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 RIOX1Q9H6W3 641 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 YY1AP1Q9H869 796 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 JMJD4Q9H9V9 463 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 DACH1Q9UI36 760 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 HOOK1Q9UJC3 728 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 THSD7BQ9C0I4 1608 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 CCDC172P0C7W6 258 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 ERCC5P28715 1186 aaPredicted RBP11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 FUT2Q10981 343 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 NR5A1Q13285 461 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 CUL4BQ13620 913 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 NCAPH2Q6IBW4 605 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 MAMSTRQ6ZN01 415 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 PPFIBP1Q86W92 1011 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 DIS3L2Q8IYB7 885 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 TRIML1Q8N9V2 468 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 SMCR8Q8TEV9 937 aaPredicted RBP11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 PARK7Q99497 189 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 NAA15Q9BXJ9 866 aaKnown RBP11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 VPS54Q9P1Q0 977 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 SMCHD1A6NHR9 2005 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 CNTNAP5Q8WYK1 1306 aa11.03□□□□□ -0.64
SEMA4D-215ENST00000469653 VWA5AO00534 786 aa11.02□□□□□ -0.64
SEMA4D-215ENST00000469653 IFNAR1P17181 557 aa11.02□□□□□ -0.64
SEMA4D-215ENST00000469653 SMARCA1P28370 1054 aa11.02□□□□□ -0.64
SEMA4D-215ENST00000469653 MAGEA9P43362 315 aa11.02□□□□□ -0.64
SEMA4D-215ENST00000469653 RNASE9P60153 205 aaKnown RBP11.02□□□□□ -0.64
SEMA4D-215ENST00000469653 TAF1CQ15572 869 aaPredicted RBP11.02□□□□□ -0.64
SEMA4D-215ENST00000469653 C1orf131Q8NDD1 294 aaKnown RBP11.02□□□□□ -0.64
SEMA4D-215ENST00000469653 FAM71BQ8TC56 605 aa11.02□□□□□ -0.64
SEMA4D-215ENST00000469653 CENPHQ9H3R5 247 aa11.02□□□□□ -0.64
SEMA4D-215ENST00000469653 FAM204AQ9H8W3 233 aa11.02□□□□□ -0.64
SEMA4D-215ENST00000469653 CTAGE15A4D2H0 777 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 MMP1P03956 469 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 CTAGE8P0CG41 777 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 AMPD2Q01433 879 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 CDKAL1Q5VV42 579 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 CTAGE6Q86UF2 777 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 CTAGE4Q8IX94 777 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 PIGSQ96S52 555 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 CSRNP2Q9H175 543 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 VPS16Q9H269 839 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 BLZF1Q9H2G9 400 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 ADAMTS5Q9UNA0 930 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 V9GY48 417 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 MYPNQ86TC9 1320 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 PEX10O60683 326 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 ZBED4O75132 1171 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 SYF2O95926 243 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 FECHP22830 423 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 DPYDQ12882 1025 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 SPATA1Q5VX52 437 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 CCDC174Q6PII3 467 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 POTEEQ6S8J3 1075 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 RRP36Q96EU6 259 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 NAPGQ99747 312 aaPredicted RBP11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 RANBP17Q9H2T7 1088 aaKnown RBP11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 SLC38A10Q9HBR0 1119 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 GUCA1BQ9UMX6 200 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 A0A0G2JMZ2 1700 aa11.02□□□□□ -0.65
SEMA4D-215ENST00000469653 RRM1P23921 792 aa11.01□□□□□ -0.65
SEMA4D-215ENST00000469653 CDC37Q16543 378 aaPredicted RBP11.01□□□□□ -0.65
SEMA4D-215ENST00000469653 DNAJC5GQ8N7S2 189 aa11.01□□□□□ -0.65
SEMA4D-215ENST00000469653 PAGR1Q9BTK6 254 aa11.01□□□□□ -0.65
SEMA4D-215ENST00000469653 ATP2C2O75185 946 aa11.01□□□□□ -0.65
SEMA4D-215ENST00000469653 PRPF6O94906 941 aaKnown RBP11.01□□□□□ -0.65
SEMA4D-215ENST00000469653 ALDH1A1P00352 501 aa11.01□□□□□ -0.65
SEMA4D-215ENST00000469653 ICE2Q659A1 982 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms