RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 IRF2BP2Q7Z5L9 587 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 KSR1Q8IVT5 923 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 TAF4BQ92750 862 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 BMP2KQ9NSY1 1161 aaPredicted RBP13.25□□□□□ -0.29
VARS2-205ENST00000469358 HDAC9Q9UKV0 1011 aa13.25□□□□□ -0.29
VARS2-205ENST00000469358 COL16A1Q07092 1604 aaPredicted RBP13.24□□□□□ -0.29
VARS2-205ENST00000469358 ESYT2A0FGR8 921 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 DAPK3O43293 454 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 RPS6KA4O75676 772 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 HOXD13P35453 343 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 SPRED3Q2MJR0 410 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 METTL13Q8N6R0 699 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 ZNF473Q8WTR7 871 aaKnown RBP13.24□□□□□ -0.29
VARS2-205ENST00000469358 CCT8L2Q96SF2 557 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 SPATA31A5Q5VU36 1347 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 SPATA31A7Q8IWB4 1347 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 COL14A1Q05707 1796 aaKnown RBP13.24□□□□□ -0.29
VARS2-205ENST00000469358 ATP2C2O75185 946 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 CACNB3P54284 484 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 PROM2Q8N271 834 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 OTUD6BQ8N6M0 293 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 IQCDQ96DY2 449 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 ATP6V1G3Q96LB4 118 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 DAGLAQ9Y4D2 1042 aa13.24□□□□□ -0.29
VARS2-205ENST00000469358 H0YHG0 523 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 C6orf229H3BNL8 230 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 SART1O43290 800 aaKnown RBP13.23□□□□□ -0.29
VARS2-205ENST00000469358 PPP1R37O75864 691 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 KIF4AO95239 1232 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 CPP00450 1065 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 UCHL3P15374 230 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 ZNF543Q08ER8 600 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 PSMD2Q13200 908 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 PTGISQ16647 500 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 GLE1Q53GS7 698 aaKnown RBP13.23□□□□□ -0.29
VARS2-205ENST00000469358 KDM7AQ6ZMT4 941 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 MMS22LQ6ZRQ5 1243 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 SFR1Q86XK3 245 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 UBLCP1Q8WVY7 318 aaPredicted RBP13.23□□□□□ -0.29
VARS2-205ENST00000469358 CDCA7Q9BWT1 371 aaPredicted RBP13.23□□□□□ -0.29
VARS2-205ENST00000469358 POLLQ9UGP5 575 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 CCNL1Q9UK58 526 aaPredicted RBP13.23□□□□□ -0.29
VARS2-205ENST00000469358 LEMD3Q9Y2U8 911 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 AKAP3O75969 853 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 TNFRSF8P28908 595 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 MNAT1P51948 309 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 ITGB3BPQ13352 177 aaPredicted RBP13.23□□□□□ -0.29
VARS2-205ENST00000469358 PRR16Q569H4 304 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 ALKBH5Q6P6C2 394 aaKnown RBP13.23□□□□□ -0.29
VARS2-205ENST00000469358 CCDC65Q8IXS2 484 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 CUL5Q93034 780 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 OSGEPQ9NPF4 335 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 PCDHB13Q9Y5F0 798 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 ABCB11O95342 1321 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 PNMA6FA0A0J9YX94 578 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 TTI1O43156 1089 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 MDH1P40925 334 aaKnown RBP13.23□□□□□ -0.29
VARS2-205ENST00000469358 QPCTQ16769 361 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 NLRP14Q86W24 1093 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 CNBD1Q8NA66 436 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 CYP2W1Q8TAV3 490 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 MYCBPAPQ8TBZ2 947 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 EPN3Q9H201 632 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 NAGPAQ9UK23 515 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 FBXL5Q9UKA1 691 aa13.23□□□□□ -0.29
VARS2-205ENST00000469358 NOC2LQ9Y3T9 749 aaKnown RBP13.23□□□□□ -0.29
VARS2-205ENST00000469358 PON1P27169 355 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 DPY19L2P1Q6NXN4 242 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 CATSPER3Q86XQ3 398 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 ZFPM1Q8IX07 1006 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 TRIM51Q9BSJ1 452 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 TAF1DQ9H5J8 278 aaPredicted RBP13.22□□□□□ -0.29
VARS2-205ENST00000469358 AIPL1Q9NZN9 384 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 CNOT8Q9UFF9 292 aaKnown RBP13.22□□□□□ -0.29
VARS2-205ENST00000469358 CHORDC1Q9UHD1 332 aaPredicted RBP13.22□□□□□ -0.29
VARS2-205ENST00000469358 TSKSQ9UJT2 592 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 PCDHAC2Q9Y5I4 1007 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 KRIT1O00522 736 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 CETN3O15182 167 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 GFPT2O94808 682 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 ABCB4P21439 1286 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 CTNNA1P35221 906 aaKnown RBP13.22□□□□□ -0.29
VARS2-205ENST00000469358 PPP4R3AQ6IN85 833 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 U2AF1L4Q8WU68 220 aaKnown RBP13.22□□□□□ -0.29
VARS2-205ENST00000469358 REEP2Q9BRK0 252 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 TNRC6CQ9HCJ0 1690 aaKnown RBP13.22□□□□□ -0.29
VARS2-205ENST00000469358 ZBTB39O15060 712 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 KIAA0754O94854 1291 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 CLK2P49760 499 aaKnown RBP13.22□□□□□ -0.29
VARS2-205ENST00000469358 TNNC1P63316 161 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 ZNF844Q08AG5 666 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
VARS2-205ENST00000469358 PRPF4BQ13523 1007 aaKnown RBP13.22□□□□□ -0.29
VARS2-205ENST00000469358 USH1GQ495M9 461 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 RPGRQ92834 1020 aaKnown RBP13.22□□□□□ -0.29
VARS2-205ENST00000469358 EDEM3Q9BZQ6 932 aa13.22□□□□□ -0.29
VARS2-205ENST00000469358 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.294e-6■■■■■ 47.7
VARS2-205ENST00000469358 ARMCX3Q9UH62 379 aaPredicted RBP13.22□□□□□ -0.29
VARS2-205ENST00000469358 NAV1Q8NEY1 1877 aa13.21□□□□□ -0.29
VARS2-205ENST00000469358 MEFVO15553 781 aaPredicted RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms