RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 C16orf86Q6ZW13 317 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 LDHDQ86WU2 507 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 TEX13BQ9BXU2 312 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 KRIT1O00522 736 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 ARMCX2Q7L311 632 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 PSPC1Q8WXF1 523 aaKnown RBP16.36■□□□□ 0.21
LIMS2-213ENST00000469300 MMP19Q99542 508 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 MSTO1Q9BUK6 570 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 GIPC1O14908 333 aa16.36■□□□□ 0.21
LIMS2-213ENST00000469300 RPAP3Q9H6T3 665 aaPredicted RBP16.36■□□□□ 0.21
LIMS2-213ENST00000469300 ARHGAP23Q9P227 1491 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 CLNS1AP54105 237 aaKnown RBP16.35■□□□□ 0.21
LIMS2-213ENST00000469300 PEX3P56589 373 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 PSMC5P62195 406 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 PADI6Q6TGC4 694 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 SMYD4Q8IYR2 804 aaPredicted RBP16.35■□□□□ 0.21
LIMS2-213ENST00000469300 GRAMD1CQ8IYS0 662 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 NDST4Q9H3R1 872 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 TYW1Q9NV66 732 aaKnown RBP16.35■□□□□ 0.21
LIMS2-213ENST00000469300 GCNT4Q9P109 453 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 FER1L4A9Z1Z3 1794 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 SLC26A4O43511 780 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 SETSIPP0DME0 302 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 MFSD14CQ5VZR4 134 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 RINT1Q6NUQ1 792 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 CCT6BQ92526 530 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 KIF2CQ99661 725 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 A6NJR5 290 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 IPO5O00410 1097 aaKnown RBP16.35■□□□□ 0.21
LIMS2-213ENST00000469300 NLRP4Q96MN2 994 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 PCIF1Q9H4Z3 704 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 IFNB1P01574 187 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 SRGAP2CP0DJJ0 459 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 GYS1P13807 737 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 DPEP1P16444 411 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 PTPN21Q16825 1174 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 MAP7D1Q3KQU3 841 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 CASC4Q6P4E1 433 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 ELMSAN1Q6PJG2 1045 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 DESI2Q9BSY9 194 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 PYCARDQ9ULZ3 195 aa16.35■□□□□ 0.21
LIMS2-213ENST00000469300 INPP5BP32019 993 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 KIAA1841Q6NSI8 718 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 BBS5Q8N3I7 341 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 MB21D1Q8N884 522 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 ZNF280CQ8ND82 737 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 RAD54LQ92698 747 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 BRD3Q15059 726 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 RSRC2Q7L4I2 434 aaKnown RBP16.34■□□□□ 0.21
LIMS2-213ENST00000469300 ATP2A3Q93084 1043 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 CPVLQ9H3G5 476 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 ZNF302Q9NR11 478 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 OATP04181 439 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 GABPAQ06546 454 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 PPFIA1Q13136 1202 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 EPHA7Q15375 998 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 C11orf57Q6ZUT1 292 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-213ENST00000469300 SMIM5Q71RC9 77 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 EEF2KMTQ96G04 330 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 VCPKMTQ9H867 229 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 ZNF609O15014 1411 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 TYW5A2RUC4 315 aaKnown RBP16.34■□□□□ 0.21
LIMS2-213ENST00000469300 ABL1P00519 1130 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 HMGCS2P54868 508 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 PDIA5Q14554 519 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 Q3C1V9 767 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 CEP55Q53EZ4 464 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 MKRN1Q9UHC7 482 aaKnown RBP16.34■□□□□ 0.21
LIMS2-213ENST00000469300 MEGF6O75095 1541 aa16.34■□□□□ 0.21
LIMS2-213ENST00000469300 PDS5AQ29RF7 1337 aaKnown RBP16.33■□□□□ 0.21
LIMS2-213ENST00000469300 PHBP35232 272 aa16.33■□□□□ 0.21
LIMS2-213ENST00000469300 TGFB2P61812 414 aa16.33■□□□□ 0.21
LIMS2-213ENST00000469300 PNMA8AQ86V59 439 aaPredicted RBP16.33■□□□□ 0.21
LIMS2-213ENST00000469300 XXYLT1Q8NBI6 393 aa16.33■□□□□ 0.21
LIMS2-213ENST00000469300 PFDN6O15212 129 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 NDUFB10O96000 172 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 HSPA6P17066 643 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 SLC12A2P55011 1212 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 GSDMBQ8TAX9 411 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 NCAPGQ9BPX3 1015 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 RNF14Q9UBS8 474 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 POTEMA6NI47 508 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 BFSP1Q12934 665 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 FYB2Q5VWT5 728 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 ZNF653Q96CK0 615 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 TIPINQ9BVW5 301 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 SLC12A6Q9UHW9 1150 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 CLDN3O15551 220 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 ZNF500O60304 480 aaPredicted RBP16.33■□□□□ 0.2
LIMS2-213ENST00000469300 SEPT6Q14141 434 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 ELF2Q15723 593 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 MTFR1LQ9H019 292 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 LRRC4Q9HBW1 653 aa16.33■□□□□ 0.2
LIMS2-213ENST00000469300 PSMD14O00487 310 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 MYL3P08590 195 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 SNAPC2Q13487 334 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 DENND2CQ68D51 928 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 FAM149B1Q96BN6 582 aa16.32■□□□□ 0.2
LIMS2-213ENST00000469300 FAM49AQ9H0Q0 323 aaPredicted RBP16.32■□□□□ 0.2
LIMS2-213ENST00000469300 DDX41Q9UJV9 622 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms