RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 NFASCO94856 1347 aa21.09■□□□□ 0.97
SMC4-209ENST00000468653 TRIM49BA6NDI0 452 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 CCNE2O96020 404 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 TPM3P06753 285 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 EDNRBP24530 442 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 CCNE1P24864 410 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 ZNF157P51786 506 aaPredicted RBP21.08■□□□□ 0.97
SMC4-209ENST00000468653 CDKAL1Q5VV42 579 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 RINT1Q6NUQ1 792 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 SEPT14Q6ZU15 432 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 TRIM47Q96LD4 638 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 PARK7Q99497 189 aaKnown RBP21.08■□□□□ 0.97
SMC4-209ENST00000468653 SENP7Q9BQF6 1050 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 REEP2Q9BRK0 252 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 PORCNQ9H237 461 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 EFCC1Q9HA90 598 aa21.08■□□□□ 0.97
SMC4-209ENST00000468653 ICAM3P32942 547 aa21.08■□□□□ 0.96
SMC4-209ENST00000468653 PMS1P54277 932 aaKnown RBP21.08■□□□□ 0.96
SMC4-209ENST00000468653 GUF1Q8N442 669 aaKnown RBP21.08■□□□□ 0.96
SMC4-209ENST00000468653 JPH1Q9HDC5 661 aaPredicted RBP21.08■□□□□ 0.96
SMC4-209ENST00000468653 TBC1D7Q9P0N9 293 aa21.08■□□□□ 0.96
SMC4-209ENST00000468653 FRMD3A2A2Y4 597 aa21.07■□□□□ 0.96
SMC4-209ENST00000468653 ARHGEF35A5YM69 484 aa21.07■□□□□ 0.96
SMC4-209ENST00000468653 TBCAO75347 108 aaKnown RBP21.07■□□□□ 0.96
SMC4-209ENST00000468653 PSMC5P62195 406 aa21.07■□□□□ 0.96
SMC4-209ENST00000468653 TTI2Q6NXR4 508 aa21.07■□□□□ 0.96
SMC4-209ENST00000468653 NAP1L5Q96NT1 182 aaPredicted RBP21.07■□□□□ 0.96
SMC4-209ENST00000468653 PTPN18Q99952 460 aa21.07■□□□□ 0.96
SMC4-209ENST00000468653 SLC9A2Q9UBY0 812 aa21.07■□□□□ 0.96
SMC4-209ENST00000468653 PCDHA10Q9Y5I2 948 aa21.07■□□□□ 0.96
SMC4-209ENST00000468653 TRPM7Q96QT4 1865 aa21.07■□□□□ 0.96
SMC4-209ENST00000468653 DNAJC25-GNG10A0A024R161 153 aa21.06■□□□□ 0.96
SMC4-209ENST00000468653 LRRC41Q15345 812 aa21.06■□□□□ 0.96
SMC4-209ENST00000468653 C1orf186Q6ZWK4 172 aa21.06■□□□□ 0.96
SMC4-209ENST00000468653 SMAP1Q8IYB5 467 aaPredicted RBP21.06■□□□□ 0.96
SMC4-209ENST00000468653 MYOCDQ8IZQ8 938 aa21.06■□□□□ 0.96
SMC4-209ENST00000468653 NRBP1Q9UHY1 535 aa21.06■□□□□ 0.96
SMC4-209ENST00000468653 KIAA1217Q5T5P2 1943 aa21.06■□□□□ 0.96
SMC4-209ENST00000468653 LYPLA2O95372 231 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 SPAG1Q07617 926 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 ANKRD40Q6AI12 368 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 CCDC186Q7Z3E2 898 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 RASAL3Q86YV0 1011 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 ANKRD20A12PQ8NF67 263 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 NOC3LQ8WTT2 800 aaKnown RBP21.05■□□□□ 0.96
SMC4-209ENST00000468653 CTAGE1Q96RT6 745 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 KCND2Q9NZV8 630 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 MORF4L1Q9UBU8 362 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 COL4A3BPQ9Y5P4 624 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 PSAPP07602 524 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 SP4Q02446 784 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 UGCGQ16739 394 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 CENPPQ6IPU0 288 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 CREBRFQ8IUR6 639 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 C4orf19Q8IY42 314 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 CSGALNACT2Q8N6G5 542 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 GLIS3Q8NEA6 775 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 CCDC43Q96MW1 224 aaKnown RBP21.05■□□□□ 0.96
SMC4-209ENST00000468653 SRRTQ9BXP5 876 aaKnown RBP21.05■□□□□ 0.96
SMC4-209ENST00000468653 THAP9Q9H5L6 903 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 BCAS3Q9H6U6 928 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 DBR1Q9UK59 544 aaKnown RBP21.05■□□□□ 0.96
SMC4-209ENST00000468653 PCDHA2Q9Y5H9 948 aa21.05■□□□□ 0.96
SMC4-209ENST00000468653 SORBS3O60504 671 aa21.04■□□□□ 0.96
SMC4-209ENST00000468653 FAM13AO94988 1023 aa21.04■□□□□ 0.96
SMC4-209ENST00000468653 KIF20AO95235 890 aa21.04■□□□□ 0.96
SMC4-209ENST00000468653 PTGS1P23219 599 aa21.04■□□□□ 0.96
SMC4-209ENST00000468653 TMC6Q7Z403 805 aa21.04■□□□□ 0.96
SMC4-209ENST00000468653 SAPCD2Q86UD0 394 aa21.04■□□□□ 0.96
SMC4-209ENST00000468653 ZSCAN30Q86W11 494 aa21.04■□□□□ 0.96
SMC4-209ENST00000468653 SFR1Q86XK3 245 aa21.04■□□□□ 0.96
SMC4-209ENST00000468653 DUSP9Q99956 384 aaKnown RBP21.04■□□□□ 0.96
SMC4-209ENST00000468653 SEMA6BQ9H3T3 888 aa21.04■□□□□ 0.96
SMC4-209ENST00000468653 MANSC4A6NHS7 340 aaPredicted RBP21.03■□□□□ 0.96
SMC4-209ENST00000468653 RSPH10B2B2RC85 870 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 KCNJ18B7U540 433 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 RSPH10BP0C881 870 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 GAP43P17677 238 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 YWHABP31946 246 aaKnown RBP21.03■□□□□ 0.96
SMC4-209ENST00000468653 ACTR2P61160 394 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 SP2Q02086 613 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 KCNJ12Q14500 433 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 FILIP1LQ4L180 1135 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 RGMBQ6NW40 437 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 CYFIP1Q7L576 1253 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 EEPD1Q7L9B9 569 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 FILIP1Q7Z7B0 1213 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 FGD4Q96M96 766 aa21.03■□□□□ 0.96
SMC4-209ENST00000468653 MAGEC2Q9UBF1 373 aaPredicted RBP21.03■□□□□ 0.96
SMC4-209ENST00000468653 ESPNB1AK53 854 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 DKC1O60832 514 aaKnown RBP eCLIP21.02■□□□□ 0.96
SMC4-209ENST00000468653 CCDC144BQ3MJ40 725 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 TCP11X2Q5H9J9 407 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 MIS18BP1Q6P0N0 1132 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 PADI6Q6TGC4 694 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 ATP6V0A1Q93050 837 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 ZNF830Q96NB3 372 aaPredicted RBP21.02■□□□□ 0.96
SMC4-209ENST00000468653 TSG101Q99816 390 aa21.02■□□□□ 0.96
SMC4-209ENST00000468653 GPBP1L1Q9HC44 474 aaPredicted RBP21.02■□□□□ 0.96
SMC4-209ENST00000468653 POLD4Q9HCU8 107 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms