RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 SP2Q02086 613 aa22.9■■□□□ 1.26
TMEM53-207ENST00000468117 GIT2Q14161 759 aa22.9■■□□□ 1.26
TMEM53-207ENST00000468117 CCDC65Q8IXS2 484 aa22.9■■□□□ 1.26
TMEM53-207ENST00000468117 DRC7Q8IY82 874 aa22.9■■□□□ 1.26
TMEM53-207ENST00000468117 REEP2Q9BRK0 252 aa22.9■■□□□ 1.26
TMEM53-207ENST00000468117 GTPBP4Q9BZE4 634 aaKnown RBP22.9■■□□□ 1.26
TMEM53-207ENST00000468117 ZSWIM4Q9H7M6 989 aa22.9■■□□□ 1.26
TMEM53-207ENST00000468117 MYH9P35579 1960 aaKnown RBP22.9■■□□□ 1.26
TMEM53-207ENST00000468117 SERPINC1P01008 464 aa22.89■■□□□ 1.26
TMEM53-207ENST00000468117 CDK11BP21127 795 aaKnown RBP22.89■■□□□ 1.26
TMEM53-207ENST00000468117 SFNP31947 248 aa22.89■■□□□ 1.26
TMEM53-207ENST00000468117 QARSP47897 775 aaKnown RBP22.89■■□□□ 1.26
TMEM53-207ENST00000468117 TPD52L1Q16890 204 aaPredicted RBP22.89■■□□□ 1.26
TMEM53-207ENST00000468117 ZNF746Q6NUN9 644 aaPredicted RBP22.89■■□□□ 1.26
TMEM53-207ENST00000468117 RINT1Q6NUQ1 792 aa22.89■■□□□ 1.26
TMEM53-207ENST00000468117 RGMBQ6NW40 437 aa22.89■■□□□ 1.26
TMEM53-207ENST00000468117 EEPD1Q7L9B9 569 aa22.89■■□□□ 1.26
TMEM53-207ENST00000468117 GLIS3Q8NEA6 775 aa22.89■■□□□ 1.26
TMEM53-207ENST00000468117 MORF4L1Q9UBU8 362 aa22.89■■□□□ 1.26
TMEM53-207ENST00000468117 TELO2Q9Y4R8 837 aa22.89■■□□□ 1.26
TMEM53-207ENST00000468117 NFASCO94856 1347 aa22.89■■□□□ 1.25
TMEM53-207ENST00000468117 ICAM3P32942 547 aa22.89■■□□□ 1.25
TMEM53-207ENST00000468117 SP4Q02446 784 aa22.89■■□□□ 1.25
TMEM53-207ENST00000468117 PSMD2Q13200 908 aa22.89■■□□□ 1.25
TMEM53-207ENST00000468117 UGCGQ16739 394 aa22.89■■□□□ 1.25
TMEM53-207ENST00000468117 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.89■■□□□ 1.25
TMEM53-207ENST00000468117 DHTKD1Q96HY7 919 aaPredicted RBP22.89■■□□□ 1.25
TMEM53-207ENST00000468117 ZHX3Q9H4I2 956 aa22.89■■□□□ 1.25
TMEM53-207ENST00000468117 JPH1Q9HDC5 661 aaPredicted RBP22.89■■□□□ 1.25
TMEM53-207ENST00000468117 TBC1D7Q9P0N9 293 aa22.89■■□□□ 1.25
TMEM53-207ENST00000468117 FRMD3A2A2Y4 597 aa22.88■■□□□ 1.25
TMEM53-207ENST00000468117 HERC4Q5GLZ8 1057 aaPredicted RBP22.88■■□□□ 1.25
TMEM53-207ENST00000468117 POLD4Q9HCU8 107 aa22.88■■□□□ 1.25
TMEM53-207ENST00000468117 SLC9A2Q9UBY0 812 aa22.88■■□□□ 1.25
TMEM53-207ENST00000468117 CDC25BP30305 580 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 LRRC41Q15345 812 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 COBLL1Q53SF7 1204 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 FAM26FQ5R3K3 315 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 SENP7Q9BQF6 1050 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 PCDHA10Q9Y5I2 948 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 RSPH10B2B2RC85 870 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 B4DLN1 442 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 IGF2BP3O00425 579 aaKnown RBP eCLIP22.87■■□□□ 1.25
TMEM53-207ENST00000468117 RSPH10BP0C881 870 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 UBASH3AP57075 661 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 CDKAL1Q5VV42 579 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 C1orf186Q6ZWK4 172 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 FGFBP2Q9BYJ0 223 aa22.87■■□□□ 1.25
TMEM53-207ENST00000468117 PPP1R2P41236 205 aa22.86■■□□□ 1.25
TMEM53-207ENST00000468117 CYFIP1Q7L576 1253 aa22.86■■□□□ 1.25
TMEM53-207ENST00000468117 TRMT1LQ7Z2T5 733 aaKnown RBP22.86■■□□□ 1.25
TMEM53-207ENST00000468117 SMAP1Q8IYB5 467 aaPredicted RBP22.86■■□□□ 1.25
TMEM53-207ENST00000468117 RDM1Q8NG50 284 aa22.86■■□□□ 1.25
TMEM53-207ENST00000468117 P2RX5Q93086 422 aa22.86■■□□□ 1.25
TMEM53-207ENST00000468117 MPHOSPH6Q99547 160 aaKnown RBP22.86■■□□□ 1.25
TMEM53-207ENST00000468117 PCDHA2Q9Y5H9 948 aa22.86■■□□□ 1.25
TMEM53-207ENST00000468117 MANSC4A6NHS7 340 aaPredicted RBP22.86■■□□□ 1.25
TMEM53-207ENST00000468117 KIF3CO14782 793 aa22.86■■□□□ 1.25
TMEM53-207ENST00000468117 CCNE1P24864 410 aa22.86■■□□□ 1.25
TMEM53-207ENST00000468117 PSMC5P62195 406 aa22.86■■□□□ 1.25
TMEM53-207ENST00000468117 TTI2Q6NXR4 508 aa22.86■■□□□ 1.25
TMEM53-207ENST00000468117 NAP1L5Q96NT1 182 aaPredicted RBP22.86■■□□□ 1.25
TMEM53-207ENST00000468117 ADORA2AP29274 412 aa22.85■■□□□ 1.25
TMEM53-207ENST00000468117 ACTR2P61160 394 aa22.85■■□□□ 1.25
TMEM53-207ENST00000468117 FAM110CQ1W6H9 321 aa22.85■■□□□ 1.25
TMEM53-207ENST00000468117 GUF1Q8N442 669 aaKnown RBP22.85■■□□□ 1.25
TMEM53-207ENST00000468117 TRIM47Q96LD4 638 aa22.85■■□□□ 1.25
TMEM53-207ENST00000468117 NRBP1Q9UHY1 535 aa22.85■■□□□ 1.25
TMEM53-207ENST00000468117 DOCK3Q8IZD9 2030 aa22.85■■□□□ 1.25
TMEM53-207ENST00000468117 ARHGEF35A5YM69 484 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 TMEM150BA6NC51 233 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 LYPLA2O95372 231 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 UBA1P22314 1058 aaKnown RBP22.84■■□□□ 1.25
TMEM53-207ENST00000468117 YWHABP31946 246 aaKnown RBP22.84■■□□□ 1.25
TMEM53-207ENST00000468117 ANKRD40Q6AI12 368 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 C4orf19Q8IY42 314 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 SEMA6BQ9H3T3 888 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 TBCAO75347 108 aaKnown RBP22.84■■□□□ 1.25
TMEM53-207ENST00000468117 SLC10A3P09131 477 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 HS1BP3Q53T59 392 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 SFR1Q86XK3 245 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 DUSP9Q99956 384 aaKnown RBP22.84■■□□□ 1.25
TMEM53-207ENST00000468117 SH2D3AQ9BRG2 576 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 GABBR1Q9UBS5 961 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 TLL2Q9Y6L7 1015 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 IVNS1ABPQ9Y6Y0 642 aa22.84■■□□□ 1.25
TMEM53-207ENST00000468117 BICDL2A1A5D9 508 aa22.83■■□□□ 1.25
TMEM53-207ENST00000468117 SFI1A8K8P3 1242 aa22.83■■□□□ 1.25
TMEM53-207ENST00000468117 RARRES1P49788 294 aa22.83■■□□□ 1.25
TMEM53-207ENST00000468117 UTP14CQ5TAP6 766 aaKnown RBP22.83■■□□□ 1.25
TMEM53-207ENST00000468117 CENPPQ6IPU0 288 aa22.83■■□□□ 1.25
TMEM53-207ENST00000468117 MYOCDQ8IZQ8 938 aa22.83■■□□□ 1.25
TMEM53-207ENST00000468117 CPA4Q9UI42 421 aa22.83■■□□□ 1.25
TMEM53-207ENST00000468117 DBR1Q9UK59 544 aaKnown RBP22.83■■□□□ 1.25
TMEM53-207ENST00000468117 GOLGA6L6A8MZA4 724 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 CBFA2T2O43439 604 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 PSAPP07602 524 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 SWSAP1Q6NVH7 229 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 PADI6Q6TGC4 694 aa22.82■■□□□ 1.24
TMEM53-207ENST00000468117 ABHD15Q6UXT9 468 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms