RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 NPR1P16066 1061 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 RARSP54136 660 aaKnown RBP6.28□□□□□ -1.4
U2AF1-207ENST00000468039 SLC7A5Q01650 507 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 NEXNQ0ZGT2 675 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 AUHQ13825 339 aaKnown RBP6.28□□□□□ -1.4
U2AF1-207ENST00000468039 TCEAL1Q15170 157 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 STYK1Q6J9G0 422 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 SLC23A3Q6PIS1 610 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 MCF2L2Q86YR7 1114 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 C7orf61Q8IZ16 206 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 RPGRQ92834 1020 aaKnown RBP6.28□□□□□ -1.4
U2AF1-207ENST00000468039 MASTLQ96GX5 879 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 GMLQ99445 158 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 DSCC1Q9BVC3 393 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 FAM86C1Q9NVL1 165 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 ACTR10Q9NZ32 417 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 TNNQ9UQP3 1299 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 COL4A1P02462 1669 aa6.28□□□□□ -1.4
U2AF1-207ENST00000468039 ABCC4O15439 1325 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 RNF123Q5XPI4 1314 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 RIC1Q4ADV7 1423 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 ANKRD62A6NC57 917 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 SMAD7O15105 426 aaKnown RBP6.27□□□□□ -1.41
U2AF1-207ENST00000468039 BCAR3O75815 825 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 YY1P25490 414 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 GCKRQ14397 625 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 ALDH1L2Q3SY69 923 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 CRY2Q49AN0 593 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 SLC10A5Q5PT55 438 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 NOL9Q5SY16 702 aaKnown RBP6.27□□□□□ -1.41
U2AF1-207ENST00000468039 BEND3Q5T5X7 828 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 NFXL1Q6ZNB6 911 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 UBE3BQ7Z3V4 1068 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 NOP9Q86U38 636 aaKnown RBP6.27□□□□□ -1.41
U2AF1-207ENST00000468039 ZBTB38Q8NAP3 1195 aaPredicted RBP6.27□□□□□ -1.41
U2AF1-207ENST00000468039 DAGLBQ8NCG7 672 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 CCDC191Q8NCU4 936 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 SYTL5Q8TDW5 730 aaPredicted RBP6.27□□□□□ -1.41
U2AF1-207ENST00000468039 TANGO6Q9C0B7 1094 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 PRDM14Q9GZV8 571 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 CHST7Q9NS84 486 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 PRR13Q9NZ81 148 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 PRKAG3Q9UGI9 489 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 NOB1Q9ULX3 412 aaKnown RBP6.27□□□□□ -1.41
U2AF1-207ENST00000468039 CACNA1SQ13698 1873 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 DDX60Q8IY21 1712 aaKnown RBP6.27□□□□□ -1.41
U2AF1-207ENST00000468039 SLX4Q8IY92 1834 aa6.27□□□□□ -1.41
U2AF1-207ENST00000468039 SHISA3A0PJX4 238 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 C9IYK1 514 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 SIGLEC6O43699 453 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 PCCAP05165 728 aaPredicted RBP6.26□□□□□ -1.41
U2AF1-207ENST00000468039 CT47B1P0C2W7 299 aaPredicted RBP6.26□□□□□ -1.41
U2AF1-207ENST00000468039 ITGA4P13612 1032 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 ATP2B1P20020 1258 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 PRELPP51888 382 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 PCBP3P57721 371 aaKnown RBP6.26□□□□□ -1.41
U2AF1-207ENST00000468039 EGR3Q06889 387 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 ZNF792Q3KQV3 632 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 ANKRD39Q53RE8 183 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 HEATR6Q6AI08 1181 aaKnown RBP6.26□□□□□ -1.41
U2AF1-207ENST00000468039 VHLLQ6RSH7 139 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 TMC3Q7Z5M5 1100 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 PPFIBP1Q86W92 1011 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 WFDC3Q8IUB2 231 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 ZNF655Q8N720 491 aaPredicted RBP6.26□□□□□ -1.41
U2AF1-207ENST00000468039 FAM169BQ8N8A8 192 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 LINS1Q8NG48 757 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 FRAT1Q92837 279 aaPredicted RBP6.26□□□□□ -1.41
U2AF1-207ENST00000468039 CELF1Q92879 486 aaKnown RBP6.26□□□□□ -1.41
U2AF1-207ENST00000468039 RBM17Q96I25 401 aaKnown RBP6.26□□□□□ -1.41
U2AF1-207ENST00000468039 GBP3Q9H0R5 595 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 ZNF408Q9H9D4 720 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 RC3H2Q9HBD1 1191 aaKnown RBP6.26□□□□□ -1.41
U2AF1-207ENST00000468039 GFOD1Q9NXC2 390 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 LAMB2P55268 1798 aa6.26□□□□□ -1.41
U2AF1-207ENST00000468039 PTPRCP08575 1304 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 LTBP3Q9NS15 1303 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 ARFGEF1Q9Y6D6 1849 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 WASH4PA8MWX3 477 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 GRM8O00222 908 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 MEIS1O00470 390 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 BIN1O00499 593 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 PDE8AO60658 829 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 STK10O94804 968 aaKnown RBP6.25□□□□□ -1.41
U2AF1-207ENST00000468039 FARP2O94887 1054 aaPredicted RBP6.25□□□□□ -1.41
U2AF1-207ENST00000468039 PRAMEF1O95521 474 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 ESR1P03372 595 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 NAT2P11245 290 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 ALDH1B1P30837 517 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 ETFBP38117 255 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 CTSWP56202 376 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 KRTAP1-1Q07627 177 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 SNW1Q13573 536 aaKnown RBP6.25□□□□□ -1.41
U2AF1-207ENST00000468039 NCAPHQ15003 741 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 SF3B3Q15393 1217 aaKnown RBP6.25□□□□□ -1.41
U2AF1-207ENST00000468039 GAB4Q2WGN9 574 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 EPHA10Q5JZY3 1008 aa6.25□□□□□ -1.41
U2AF1-207ENST00000468039 AXDND1Q5T1B0 1012 aaPredicted RBP6.25□□□□□ -1.41
U2AF1-207ENST00000468039 LARP1BQ659C4 914 aaKnown RBP6.25□□□□□ -1.41
U2AF1-207ENST00000468039 DCAF15Q66K64 600 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms