RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 GSTTP1A0A1W2PQM5 241 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 POTEFA5A3E0 1075 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 NOP56O00567 594 aaKnown RBP13.28□□□□□ -0.28
RNF13-208ENST00000467996 SEPT4O43236 478 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 ZNF202O95125 648 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 ATG7O95352 703 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 PSAPP07602 524 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 STAT6P42226 847 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 LAMC2Q13753 1193 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 CTTNQ14247 550 aaKnown RBP13.28□□□□□ -0.28
RNF13-208ENST00000467996 E2F4Q16254 413 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 UGCGQ16739 394 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 KLHL40Q2TBA0 621 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 MIS18BP1Q6P0N0 1132 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 ABHD15Q6UXT9 468 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 TLK2Q86UE8 772 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 CCDC60Q8IWA6 550 aaPredicted RBP13.28□□□□□ -0.28
RNF13-208ENST00000467996 BANK1Q8NDB2 785 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 PPTC7Q8NI37 304 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 LRRC15Q8TF66 581 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 CDK5RAP3Q96JB5 506 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 HSD17B14Q9BPX1 270 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 PYM1Q9BRP8 204 aaKnown RBP13.28□□□□□ -0.28
RNF13-208ENST00000467996 LXNQ9BS40 222 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 PANK2Q9BZ23 570 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 NT5C3AQ9H0P0 336 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 WRAP73Q9P2S5 460 aaPredicted RBP13.28□□□□□ -0.28
RNF13-208ENST00000467996 IGSF9BQ9UPX0 1349 aa13.28□□□□□ -0.28
RNF13-208ENST00000467996 IGKV6D-21A0A0A0MT36 114 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 ACTN4O43707 911 aaKnown RBP13.27□□□□□ -0.29
RNF13-208ENST00000467996 TRAK2O60296 914 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 SLITRK3O94933 977 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 P4HBP07237 508 aaKnown RBP13.27□□□□□ -0.29
RNF13-208ENST00000467996 MUTP22033 750 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 CNGA1P29973 690 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 TCF7P36402 384 aaPredicted RBP13.27□□□□□ -0.29
RNF13-208ENST00000467996 SKOR2Q2VWA4 1001 aaPredicted RBP13.27□□□□□ -0.29
RNF13-208ENST00000467996 NAALADL2Q58DX5 795 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 RRAGBQ5VZM2 374 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 KCNK18Q7Z418 384 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 CTU1Q7Z7A3 348 aaKnown RBP13.27□□□□□ -0.29
RNF13-208ENST00000467996 SH3TC2Q8TF17 1288 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 AFG1LQ8WV93 481 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 SEPT1Q8WYJ6 367 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 DDX19AQ9NUU7 478 aaKnown RBP13.27□□□□□ -0.29
RNF13-208ENST00000467996 GABBR1Q9UBS5 961 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 SERTAD1Q9UHV2 236 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 KIAA1024Q9UPX6 916 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 Q9Y3F1 56 aa13.27□□□□□ -0.29
RNF13-208ENST00000467996 BACH1O14867 736 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 DYNC1LI2O43237 492 aaPredicted RBP13.26□□□□□ -0.29
RNF13-208ENST00000467996 KINO60870 393 aaKnown RBP13.26□□□□□ -0.29
RNF13-208ENST00000467996 DUSP11O75319 330 aaKnown RBP13.26□□□□□ -0.29
RNF13-208ENST00000467996 MMP3P08254 477 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 QARSP47897 775 aaKnown RBP13.26□□□□□ -0.29
RNF13-208ENST00000467996 PSMC5P62195 406 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 LONRF3Q496Y0 759 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 SWSAP1Q6NVH7 229 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 PDXDC2PQ6P474 469 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 KRBA2Q6ZNG9 492 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 EMSYQ7Z589 1322 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 TPH2Q8IWU9 490 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 IQUBQ8NA54 791 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 ATP6V0A1Q93050 837 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 PCYT2Q99447 389 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 ZSWIM4Q9H7M6 989 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 ZNF302Q9NR11 478 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 BLOC1S4Q9NUP1 217 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 STK17AQ9UEE5 414 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 USP25Q9UHP3 1055 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 HTTP42858 3142 aa13.26□□□□□ -0.29
RNF13-208ENST00000467996 SYNRGQ9UMZ2 1314 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 E9PMD0 336 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 LGR5O75473 907 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 LYPLA2O95372 231 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 RARBP10826 455 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 HOXD8P13378 290 aaPredicted RBP13.25□□□□□ -0.29
RNF13-208ENST00000467996 IRX5P78411 483 aaPredicted RBP13.25□□□□□ -0.29
RNF13-208ENST00000467996 SLC9C1Q4G0N8 1177 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 UTP14CQ5TAP6 766 aaKnown RBP13.25□□□□□ -0.29
RNF13-208ENST00000467996 FAM160B1Q5W0V3 765 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 CAVIN1Q6NZI2 390 aaKnown RBP13.25□□□□□ -0.29
RNF13-208ENST00000467996 TRIM50Q86XT4 487 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 CEP57L1Q8IYX8 460 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 CNNM3Q8NE01 707 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 AFAP1L1Q8TED9 768 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 RAD54LQ92698 747 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 TIGD1Q96MW7 591 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 AP5M1Q9H0R1 490 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 UPF3AQ9H1J1 476 aaKnown RBP13.25□□□□□ -0.29
RNF13-208ENST00000467996 CUEDC2Q9H467 287 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 CLSTN2Q9H4D0 955 aa13.25□□□□□ -0.29
RNF13-208ENST00000467996 DDX20Q9UHI6 824 aaKnown RBP13.25□□□□□ -0.29
RNF13-208ENST00000467996 MAFBQ9Y5Q3 323 aaPredicted RBP13.25□□□□□ -0.29
RNF13-208ENST00000467996 MYH11P35749 1972 aa13.24□□□□□ -0.29
RNF13-208ENST00000467996 A0A087WWV3 80 aa13.24□□□□□ -0.29
RNF13-208ENST00000467996 A6NJR5 290 aa13.24□□□□□ -0.29
RNF13-208ENST00000467996 ZNF862O60290 1169 aa13.24□□□□□ -0.29
RNF13-208ENST00000467996 DKC1O60832 514 aaKnown RBP eCLIP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms