RNA–Protein interactions for RNA: ENST00000467957.1

YBX1-204, Transcript of Y-box binding protein 1, humanhuman

TSL 2

Gene YBX1, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-204ENST00000467957 CAND2O75155 1236 aa21.13■□□□□ 0.97
YBX1-204ENST00000467957 TDP2O95551 362 aa21.13■□□□□ 0.97
YBX1-204ENST00000467957 MMP1P03956 469 aa21.13■□□□□ 0.97
YBX1-204ENST00000467957 KRT2P35908 639 aa21.13■□□□□ 0.97
YBX1-204ENST00000467957 PPFIA1Q13136 1202 aa21.13■□□□□ 0.97
YBX1-204ENST00000467957 INF2Q27J81 1249 aa21.13■□□□□ 0.97
YBX1-204ENST00000467957 MIS18BP1Q6P0N0 1132 aa21.13■□□□□ 0.97
YBX1-204ENST00000467957 TRAF7Q6Q0C0 670 aa21.13■□□□□ 0.97
YBX1-204ENST00000467957 TNFRSF25Q93038 417 aa21.13■□□□□ 0.97
YBX1-204ENST00000467957 MTIF3Q9H2K0 278 aaKnown RBP21.13■□□□□ 0.97
YBX1-204ENST00000467957 BRMS1Q9HCU9 246 aa21.13■□□□□ 0.97
YBX1-204ENST00000467957 TCEAL9Q9UHQ7 104 aa21.13■□□□□ 0.97
YBX1-204ENST00000467957 KAT6AQ92794 2004 aa21.12■□□□□ 0.97
YBX1-204ENST00000467957 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.12■□□□□ 0.97
YBX1-204ENST00000467957 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.12■□□□□ 0.97
YBX1-204ENST00000467957 MBLAC1A4D2B0 266 aaPredicted RBP21.12■□□□□ 0.97
YBX1-204ENST00000467957 HMGN5P82970 282 aaKnown RBP21.12■□□□□ 0.97
YBX1-204ENST00000467957 TRIM29Q14134 588 aa21.12■□□□□ 0.97
YBX1-204ENST00000467957 GPNMBQ14956 572 aa21.12■□□□□ 0.97
YBX1-204ENST00000467957 GRIK4Q16099 956 aa21.12■□□□□ 0.97
YBX1-204ENST00000467957 ZNF618Q5T7W0 954 aa21.12■□□□□ 0.97
YBX1-204ENST00000467957 FAM160B1Q5W0V3 765 aa21.12■□□□□ 0.97
YBX1-204ENST00000467957 PPP4R3AQ6IN85 833 aa21.12■□□□□ 0.97
YBX1-204ENST00000467957 DEFB128Q7Z7B8 93 aa21.12■□□□□ 0.97
YBX1-204ENST00000467957 NEK8Q86SG6 692 aa21.12■□□□□ 0.97
YBX1-204ENST00000467957 UIMC1Q96RL1 719 aa21.12■□□□□ 0.97
YBX1-204ENST00000467957 RRN3P2A6NIE6 340 aa21.11■□□□□ 0.97
YBX1-204ENST00000467957 CXCL10P02778 98 aa21.11■□□□□ 0.97
YBX1-204ENST00000467957 GCFC2P16383 781 aaKnown RBP21.11■□□□□ 0.97
YBX1-204ENST00000467957 THPOP40225 353 aa21.11■□□□□ 0.97
YBX1-204ENST00000467957 PLCB4Q15147 1175 aa21.11■□□□□ 0.97
YBX1-204ENST00000467957 KRT40Q6A162 431 aa21.11■□□□□ 0.97
YBX1-204ENST00000467957 FAM109BQ6ICB4 259 aaPredicted RBP21.11■□□□□ 0.97
YBX1-204ENST00000467957 PIK3AP1Q6ZUJ8 805 aa21.11■□□□□ 0.97
YBX1-204ENST00000467957 OTOP2Q7RTS6 562 aa21.11■□□□□ 0.97
YBX1-204ENST00000467957 RPAINQ86UA6 219 aa21.11■□□□□ 0.97
YBX1-204ENST00000467957 CCDC60Q8IWA6 550 aaPredicted RBP21.11■□□□□ 0.97
YBX1-204ENST00000467957 NAP1L4Q99733 375 aaKnown RBP21.11■□□□□ 0.97
YBX1-204ENST00000467957 ZNF302Q9NR11 478 aa21.11■□□□□ 0.97
YBX1-204ENST00000467957 PCDHA10Q9Y5I2 948 aa21.11■□□□□ 0.97
YBX1-204ENST00000467957 WDR64B1ANS9 1081 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 BACH1O14867 736 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 GAS7O60861 476 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 PSMD10O75832 226 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 PSAPP07602 524 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 ACTN1P12814 892 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 INSRRP14616 1297 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 NR5A1Q13285 461 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 LETM2Q2VYF4 491 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 EARS2Q5JPH6 523 aaKnown RBP21.1■□□□□ 0.97
YBX1-204ENST00000467957 MARCH8Q5T0T0 291 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 LRCH2Q5VUJ6 765 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 SWSAP1Q6NVH7 229 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 TAF2Q6P1X5 1199 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 ETNPPLQ8TBG4 499 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 TEKT3Q9BXF9 490 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 BACH2Q9BYV9 841 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 CXXC1Q9P0U4 656 aaPredicted RBP21.1■□□□□ 0.97
YBX1-204ENST00000467957 DDX25Q9UHL0 483 aaKnown RBP21.1■□□□□ 0.97
YBX1-204ENST00000467957 TUBE1Q9UJT0 475 aa21.1■□□□□ 0.97
YBX1-204ENST00000467957 MAFBQ9Y5Q3 323 aaPredicted RBP21.1■□□□□ 0.97
YBX1-204ENST00000467957 SZT2Q5T011 3432 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 POTEB3A0JP26 581 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 RSPH10B2B2RC85 870 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 BTBD18B2RXH4 712 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 NBNO60934 754 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 RSPH10BP0C881 870 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 SFNP31947 248 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 MCM2P49736 904 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 PDXDC2PQ6P474 469 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 POTEBQ6S5H4 581 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 B3GNT9Q6UX72 402 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 DIS3L2Q8IYB7 885 aaKnown RBP21.09■□□□□ 0.97
YBX1-204ENST00000467957 ATP8B4Q8TF62 1192 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 FTOQ9C0B1 505 aaKnown RBP eCLIP21.09■□□□□ 0.97
YBX1-204ENST00000467957 TRPC6Q9Y210 931 aa21.09■□□□□ 0.97
YBX1-204ENST00000467957 SLC37A4O43826 429 aa21.08■□□□□ 0.97
YBX1-204ENST00000467957 HBP1O60381 514 aa21.08■□□□□ 0.97
YBX1-204ENST00000467957 RPLP2P05387 115 aaKnown RBP21.08■□□□□ 0.97
YBX1-204ENST00000467957 JAK3P52333 1124 aa21.08■□□□□ 0.97
YBX1-204ENST00000467957 MBTPS1Q14703 1052 aa21.08■□□□□ 0.97
YBX1-204ENST00000467957 FAM26DQ5JW98 314 aa21.08■□□□□ 0.97
YBX1-204ENST00000467957 RDM1Q8NG50 284 aa21.08■□□□□ 0.97
YBX1-204ENST00000467957 C8orf76Q96K31 380 aa21.08■□□□□ 0.97
YBX1-204ENST00000467957 FAM20AQ96MK3 541 aa21.08■□□□□ 0.97
YBX1-204ENST00000467957 KCNMB3Q9NPA1 279 aa21.08■□□□□ 0.97
YBX1-204ENST00000467957 DISC1Q9NRI5 854 aa21.08■□□□□ 0.97
YBX1-204ENST00000467957 TET1Q8NFU7 2136 aa21.07■□□□□ 0.96
YBX1-204ENST00000467957 TBX3O15119 743 aa21.07■□□□□ 0.96
YBX1-204ENST00000467957 CCNT1O60563 726 aaKnown RBP21.07■□□□□ 0.96
YBX1-204ENST00000467957 BAIAP3O94812 1187 aa21.07■□□□□ 0.96
YBX1-204ENST00000467957 ATP4AP20648 1035 aa21.07■□□□□ 0.96
YBX1-204ENST00000467957 CNKSR3Q6P9H4 555 aa21.07■□□□□ 0.96
YBX1-204ENST00000467957 RUFY4Q6ZNE9 571 aa21.07■□□□□ 0.96
YBX1-204ENST00000467957 UNC45AQ9H3U1 944 aa21.07■□□□□ 0.96
YBX1-204ENST00000467957 SAMM50Q9Y512 469 aa21.07■□□□□ 0.96
YBX1-204ENST00000467957 SLC4A7Q9Y6M7 1214 aa21.07■□□□□ 0.96
YBX1-204ENST00000467957 LAMA2P24043 3122 aaKnown RBP21.07■□□□□ 0.96
YBX1-204ENST00000467957 COL1A2P08123 1366 aa21.07■□□□□ 0.96
YBX1-204ENST00000467957 IGSF9BQ9UPX0 1349 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms