RNA–Protein interactions for RNA: ENST00000467438.1

LINC01140-202, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2 BASIC

Gene LINC01140, Length 2,375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-202ENST00000467438 PRR16Q569H4 304 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 DPY19L2P1Q6NXN4 242 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 PPP1R18Q6NYC8 613 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 ANO3Q9BYT9 981 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 KCNMB3Q9NPA1 279 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 HDAC9Q9UKV0 1011 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 PCDHGC5Q9Y5F6 944 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 ADAMTSL1Q8N6G6 1762 aa23.44■■□□□ 1.34
LINC01140-202ENST00000467438 RAD51CO43502 376 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 KCNA1Q09470 495 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 TCP10Q12799 353 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 GJB7Q6PEY0 223 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 IFT20Q8IY31 132 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 RBM46Q8TBY0 533 aaKnown RBP23.43■■□□□ 1.34
LINC01140-202ENST00000467438 DNAJC18Q9H819 358 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 AIPL1Q9NZN9 384 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 MAGEA9P43362 315 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 MARSP56192 900 aaKnown RBP23.43■■□□□ 1.34
LINC01140-202ENST00000467438 SEPT2Q15019 361 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 CDC42EP5Q6NZY7 148 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 IRF2BP2Q7Z5L9 587 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 SFR1Q86XK3 245 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 DHX36Q9H2U1 1008 aaKnown RBP23.43■■□□□ 1.34
LINC01140-202ENST00000467438 KDM3AQ9Y4C1 1321 aa23.43■■□□□ 1.34
LINC01140-202ENST00000467438 KCNK3O14649 394 aa23.42■■□□□ 1.34
LINC01140-202ENST00000467438 EIF3HO15372 352 aaKnown RBP eCLIP23.42■■□□□ 1.34
LINC01140-202ENST00000467438 OPA1O60313 960 aa23.42■■□□□ 1.34
LINC01140-202ENST00000467438 CYP4A11Q02928 519 aa23.42■■□□□ 1.34
LINC01140-202ENST00000467438 NNTQ13423 1086 aa23.42■■□□□ 1.34
LINC01140-202ENST00000467438 DCAF17Q5H9S7 520 aaPredicted RBP23.42■■□□□ 1.34
LINC01140-202ENST00000467438 TAF1LQ8IZX4 1826 aa23.42■■□□□ 1.34
LINC01140-202ENST00000467438 POLD1P28340 1107 aa23.42■■□□□ 1.34
LINC01140-202ENST00000467438 TNFRSF8P28908 595 aa23.42■■□□□ 1.34
LINC01140-202ENST00000467438 CASP4P49662 377 aa23.42■■□□□ 1.34
LINC01140-202ENST00000467438 GIT2Q14161 759 aa23.42■■□□□ 1.34
LINC01140-202ENST00000467438 REEP2Q9BRK0 252 aa23.42■■□□□ 1.34
LINC01140-202ENST00000467438 NUCKS1Q9H1E3 243 aaKnown RBP23.42■■□□□ 1.34
LINC01140-202ENST00000467438 KCNQ5Q9NR82 932 aa23.42■■□□□ 1.34
LINC01140-202ENST00000467438 MEIS2O14770 477 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 CETN3O15182 167 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 GCFC2P16383 781 aaKnown RBP23.41■■□□□ 1.34
LINC01140-202ENST00000467438 DDR1Q08345 913 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 SPIRE1Q08AE8 756 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 USH1GQ495M9 461 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 ALS2CLQ60I27 953 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 IQCKQ8N0W5 287 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 RUBCNQ92622 972 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 AP1M1Q9BXS5 423 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 TSKSQ9UJT2 592 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 FOCADQ5VW36 1801 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 SFI1A8K8P3 1242 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 AKAP3O75969 853 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 GNA14O95837 355 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 UCHL3P15374 230 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 CDC37Q16543 378 aaPredicted RBP23.41■■□□□ 1.34
LINC01140-202ENST00000467438 GPATCH4Q5T3I0 446 aaKnown RBP23.41■■□□□ 1.34
LINC01140-202ENST00000467438 FOXR2Q6PJQ5 311 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 DDX42Q86XP3 938 aaKnown RBP eCLIP23.41■■□□□ 1.34
LINC01140-202ENST00000467438 CYP2W1Q8TAV3 490 aa23.41■■□□□ 1.34
LINC01140-202ENST00000467438 CLIC2O15247 247 aa23.4■■□□□ 1.34
LINC01140-202ENST00000467438 BBOX1O75936 387 aa23.4■■□□□ 1.34
LINC01140-202ENST00000467438 SPATA31C1P0DKV0 1188 aa23.4■■□□□ 1.34
LINC01140-202ENST00000467438 EEF2P13639 858 aaKnown RBP23.4■■□□□ 1.34
LINC01140-202ENST00000467438 NOP2P46087 812 aaKnown RBP23.4■■□□□ 1.34
LINC01140-202ENST00000467438 GLE1Q53GS7 698 aaKnown RBP23.4■■□□□ 1.34
LINC01140-202ENST00000467438 USP38Q8NB14 1042 aa23.4■■□□□ 1.34
LINC01140-202ENST00000467438 FRMD3A2A2Y4 597 aa23.4■■□□□ 1.34
LINC01140-202ENST00000467438 EPB41P11171 864 aaKnown RBP23.4■■□□□ 1.34
LINC01140-202ENST00000467438 PON1P27169 355 aa23.4■■□□□ 1.34
LINC01140-202ENST00000467438 CFAP58Q5T655 872 aa23.4■■□□□ 1.34
LINC01140-202ENST00000467438 TCERG1LQ5VWI1 586 aa23.4■■□□□ 1.34
LINC01140-202ENST00000467438 SPAG5Q96R06 1193 aa23.4■■□□□ 1.34
LINC01140-202ENST00000467438 FAM86B1E9PN63 330 aa23.39■■□□□ 1.33
LINC01140-202ENST00000467438 ZEB2O60315 1214 aa23.39■■□□□ 1.33
LINC01140-202ENST00000467438 FAM86B2P0C5J1 330 aa23.39■■□□□ 1.33
LINC01140-202ENST00000467438 GUCY1A3Q02108 690 aa23.39■■□□□ 1.33
LINC01140-202ENST00000467438 ZC3H3Q8IXZ2 948 aaKnown RBP23.39■■□□□ 1.33
LINC01140-202ENST00000467438 RNPC3Q96LT9 517 aaKnown RBP23.39■■□□□ 1.33
LINC01140-202ENST00000467438 ARHGAP4P98171 946 aa23.38■■□□□ 1.33
LINC01140-202ENST00000467438 APOBEC3HQ6NTF7 200 aaKnown RBP23.38■■□□□ 1.33
LINC01140-202ENST00000467438 ETNPPLQ8TBG4 499 aa23.38■■□□□ 1.33
LINC01140-202ENST00000467438 ARMCX3Q9UH62 379 aaPredicted RBP23.38■■□□□ 1.33
LINC01140-202ENST00000467438 PAK2Q13177 524 aa23.38■■□□□ 1.33
LINC01140-202ENST00000467438 MYH4Q9Y623 1939 aa23.38■■□□□ 1.33
LINC01140-202ENST00000467438 CEP104O60308 925 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 ERVK-9P63128 1117 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 KNOP1Q1ED39 458 aaKnown RBP23.37■■□□□ 1.33
LINC01140-202ENST00000467438 OR2W6PQ8NHA6 318 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 LUC7LQ9NQ29 371 aaKnown RBP23.37■■□□□ 1.33
LINC01140-202ENST00000467438 SWAP70Q9UH65 585 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 NAGPAQ9UK23 515 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 HOXA13P31271 388 aaPredicted RBP23.37■■□□□ 1.33
LINC01140-202ENST00000467438 RPS6KA1Q15418 735 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 EXOC3L4Q17RC7 722 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 EDRF1Q3B7T1 1238 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 ARHGAP27Q6ZUM4 889 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 KSR1Q8IVT5 923 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 LENG9Q96B70 501 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 RUSC1Q9BVN2 902 aa23.37■■□□□ 1.33
LINC01140-202ENST00000467438 RNF14Q9UBS8 474 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms