RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 LMBR1Q8WVP7 490 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 DHX38Q92620 1227 aaKnown RBP12.47□□□□□ -0.41
MSH5-212ENST00000467319 GLG1Q92896 1179 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 RNPEPQ9H4A4 650 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 AZI2Q9H6S1 392 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 DISC1Q9NRI5 854 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 PCDH10Q9P2E7 1040 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 TCEAL9Q9UHQ7 104 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 NOL7Q9UMY1 257 aaKnown RBP12.47□□□□□ -0.41
MSH5-212ENST00000467319 MTMR6Q9Y217 621 aa12.47□□□□□ -0.41
MSH5-212ENST00000467319 MAFBQ9Y5Q3 323 aaPredicted RBP12.47□□□□□ -0.41
MSH5-212ENST00000467319 NRCAMQ92823 1304 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 VPS37CA5D8V6 355 aaPredicted RBP12.46□□□□□ -0.41
MSH5-212ENST00000467319 ZBTB42B2RXF5 422 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 CHMP2AO43633 222 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 ZNF862O60290 1169 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 PSAPP07602 524 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 CYP2C9P11712 490 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 ATP4AP20648 1035 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 MARK3P27448 753 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 STAT5BP51692 787 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 RESTQ13127 1097 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 PLCB4Q15147 1175 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 TRIM71Q2Q1W2 868 aaKnown RBP12.46□□□□□ -0.41
MSH5-212ENST00000467319 RILPL1Q5EBL4 403 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 FAM160B1Q5W0V3 765 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 MCTP1Q6DN14 999 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 SERINC5Q86VE9 423 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 C4orf32Q8N8J7 132 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 ATP8B4Q8TF62 1192 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 GDF15Q99988 308 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 WNT8AQ9H1J5 351 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 PRDM5Q9NQX1 630 aaPredicted RBP12.46□□□□□ -0.41
MSH5-212ENST00000467319 ZNF302Q9NR11 478 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 TMEM39AQ9NV64 488 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 PCDHB6Q9Y5E3 794 aa12.46□□□□□ -0.41
MSH5-212ENST00000467319 MYH15Q9Y2K3 1946 aa12.46□□□□□ -0.42
MSH5-212ENST00000467319 COL1A2P08123 1366 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 UMODL1Q5DID0 1318 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 C17orf102A2RUQ5 167 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 MBLAC1A4D2B0 266 aaPredicted RBP12.45□□□□□ -0.42
MSH5-212ENST00000467319 EML1O00423 815 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 PITPNM1O00562 1244 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 BACH1O14867 736 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 OR52Z1P0C646 297 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 MAGEA10P43363 369 aaPredicted RBP12.45□□□□□ -0.42
MSH5-212ENST00000467319 CHMP4BP1P59074 171 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 PRKCEQ02156 737 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 PPFIA1Q13136 1202 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 PTGISQ16647 500 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 MARCH8Q5T0T0 291 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 SWSAP1Q6NVH7 229 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 PDXDC2PQ6P474 469 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 MIER3Q7Z3K6 550 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 WNT8BQ93098 351 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 HIPK3Q9H422 1215 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.45□□□□□ -0.42
MSH5-212ENST00000467319 SIP14410 1827 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 ARID2Q68CP9 1835 aa12.45□□□□□ -0.42
MSH5-212ENST00000467319 MYH9P35579 1960 aaKnown RBP12.45□□□□□ -0.42
MSH5-212ENST00000467319 TRIP12Q14669 1992 aaPredicted RBP12.45□□□□□ -0.42
MSH5-212ENST00000467319 POTEB3A0JP26 581 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 STX6O43752 255 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 STBD1O95210 358 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 TIMP1P01033 207 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 ATP2B1P20020 1258 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 ZNF200P98182 395 aaPredicted RBP12.44□□□□□ -0.42
MSH5-212ENST00000467319 ATP2C1P98194 919 aaPredicted RBP12.44□□□□□ -0.42
MSH5-212ENST00000467319 PTK7Q13308 1070 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 ZNF174Q15697 407 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 GRIK4Q16099 956 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 TRAF7Q6Q0C0 670 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 POTEBQ6S5H4 581 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 CAGE1Q8TC20 777 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 ATP6V0A1Q93050 837 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 FAM167AQ96KS9 214 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 TTC12Q9H892 705 aaPredicted RBP12.44□□□□□ -0.42
MSH5-212ENST00000467319 SETD4Q9NVD3 440 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 GABBR1Q9UBS5 961 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 PRKAG2Q9UGJ0 569 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 SAMM50Q9Y512 469 aa12.44□□□□□ -0.42
MSH5-212ENST00000467319 LAMA2P24043 3122 aaKnown RBP12.44□□□□□ -0.42
MSH5-212ENST00000467319 TRIOBPQ9H2D6 2365 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 POTEMA6NI47 508 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 LAD1O00515 517 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 TREHO43280 583 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 HBP1O60381 514 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 CAND2O75155 1236 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 BAG4O95429 457 aaKnown RBP12.43□□□□□ -0.42
MSH5-212ENST00000467319 OATP04181 439 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 GNAT1P11488 350 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 INSRRP14616 1297 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 RAG1P15918 1043 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 PRPHP41219 470 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 FXR2P51116 673 aaKnown RBP eCLIP12.43□□□□□ -0.42
MSH5-212ENST00000467319 EPHA7Q15375 998 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 MFSD5Q6N075 450 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 RPAINQ86UA6 219 aa12.43□□□□□ -0.42
MSH5-212ENST00000467319 FERMT3Q86UX7 667 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms