RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CCDC57Q2TAC2 916 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 CYP27C1Q4G0S4 372 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 CAVIN4Q5BKX8 364 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 GADL1Q6ZQY3 521 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 VPS37DQ86XT2 251 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 ANKRD13CQ8N6S4 541 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 PI4K2BQ8TCG2 481 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 MYLIPQ8WY64 445 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 FAM84AQ96KN4 292 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 FRMD6Q96NE9 622 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 PCGF6Q9BYE7 350 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 OSBPL7Q9BZF2 842 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 NRSN2Q9GZP1 204 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 NPHS2Q9NP85 383 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 CNNM1Q9NRU3 951 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 ZHX2Q9Y6X8 837 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 DOCK1Q14185 1865 aa6.79□□□□□ -1.32
PTCD3-207ENST00000467273 CACNA1FO60840 1977 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 MROH5Q6ZUA9 1318 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 PLXNB2O15031 1838 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 PHIPQ8WWQ0 1821 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 LOC285556D6RIA3 1793 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 EIF4EBP3O60516 100 aaPredicted RBP6.78□□□□□ -1.32
PTCD3-207ENST00000467273 MSCO60682 206 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 CTNND1O60716 968 aaKnown RBP6.78□□□□□ -1.32
PTCD3-207ENST00000467273 FRAT2O75474 233 aaPredicted RBP6.78□□□□□ -1.32
PTCD3-207ENST00000467273 CTSHP09668 335 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 GYG1P46976 350 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 FOXO4P98177 505 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 HP1BP3Q5SSJ5 553 aaPredicted RBP6.78□□□□□ -1.32
PTCD3-207ENST00000467273 NETO1Q8TDF5 533 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 TRIB2Q92519 343 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 TTYH1Q9H313 450 aaPredicted RBP6.78□□□□□ -1.32
PTCD3-207ENST00000467273 LATS2Q9NRM7 1088 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 MORF4L1Q9UBU8 362 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 ATRNL1Q5VV63 1379 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 FRMPD3Q5JV73 1810 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 AK9Q5TCS8 1911 aa6.78□□□□□ -1.32
PTCD3-207ENST00000467273 ELL2O00472 640 aaPredicted RBP6.77□□□□□ -1.33
PTCD3-207ENST00000467273 PLIN1O60240 522 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 ENTPD3O75355 529 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 CYP11A1P05108 521 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 EIF4BP23588 611 aaKnown RBP6.77□□□□□ -1.33
PTCD3-207ENST00000467273 MESP2Q0VG99 397 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 RALBP1Q15311 655 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 POU4F3Q15319 338 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 AKNAD1Q5T1N1 836 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 LILRA6Q6PI73 481 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 SEZ6L2Q6UXD5 910 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 GALNT12Q8IXK2 581 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 C8orf58Q8NAV2 365 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 TOX2Q96NM4 488 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 ASB2Q96Q27 587 aa6.77□□□□□ -1.33
PTCD3-207ENST00000467273 DNM1LO00429 736 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 FAM87AP0C7U9 286 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 ZKSCAN1P17029 563 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-207ENST00000467273 MAPK4P31152 587 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 RAP1GAPP47736 663 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 MRPS5P82675 430 aaKnown RBP6.76□□□□□ -1.33
PTCD3-207ENST00000467273 FANCCQ00597 558 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 PCDH1Q08174 1060 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 CACNB2Q08289 660 aaPredicted RBP6.76□□□□□ -1.33
PTCD3-207ENST00000467273 TCP10Q12799 353 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 PDE3AQ14432 1141 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 SHHQ15465 462 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 MLANAQ16655 118 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 LCE5AQ5TCM9 118 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 LMBR1LQ6UX01 489 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 WDR66Q8TBY9 1149 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 DNAAF4Q8WXU2 420 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 IDI2Q9BXS1 227 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 C12orf49Q9H741 205 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 BCCIPQ9P287 314 aaKnown RBP eCLIP6.76□□□□□ -1.33
PTCD3-207ENST00000467273 THEGQ9P2T0 379 aa6.76□□□□□ -1.33
PTCD3-207ENST00000467273 LRRFIP2Q9Y608 721 aaKnown RBP6.76□□□□□ -1.33
PTCD3-207ENST00000467273 TRIM75PA6NK02 468 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 GADD45BO75293 160 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-207ENST00000467273 ERCC5P28715 1186 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-207ENST00000467273 RGS2P41220 211 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 CHAF1AQ13111 956 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-207ENST00000467273 CDK5R2Q13319 367 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 WDR43Q15061 677 aaKnown RBP eCLIP6.75□□□□□ -1.33
PTCD3-207ENST00000467273 CDC42EP5Q6NZY7 148 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 NXPE4Q6UWF7 544 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 METTL16Q86W50 562 aaKnown RBP6.75□□□□□ -1.33
PTCD3-207ENST00000467273 CCDC146Q8IYE0 955 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 ZSCAN18Q8TBC5 510 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-207ENST00000467273 LPAR1Q92633 364 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 USP6NLQ92738 828 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 CRELD1Q96HD1 420 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 UHRF1Q96T88 793 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-207ENST00000467273 APBA2Q99767 749 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 CORO1BQ9BR76 489 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 BCO2Q9BYV7 579 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 SENP6Q9GZR1 1112 aaPredicted RBP6.75□□□□□ -1.33
PTCD3-207ENST00000467273 RAPGEFL1Q9UHV5 662 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 MYH13Q9UKX3 1938 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 XIRP2A4UGR9 3374 aa6.75□□□□□ -1.33
PTCD3-207ENST00000467273 MYBBP1AQ9BQG0 1328 aaKnown RBP6.75□□□□□ -1.33
PTCD3-207ENST00000467273 GIPC1O14908 333 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms