RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 GRPEL1Q9HAV7 217 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 CBX8Q9HC52 389 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 VTA1Q9NP79 307 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.53□□□□□ -0.08
COL4A1-202ENST00000467182 FLRT1Q9NZU1 646 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 PCDHA10Q9Y5I2 948 aa14.53□□□□□ -0.08
COL4A1-202ENST00000467182 ARID2Q68CP9 1835 aa14.52□□□□□ -0.08
COL4A1-202ENST00000467182 IGKV6D-21A0A0A0MT36 114 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 ECM2O94769 699 aaPredicted RBP14.52□□□□□ -0.09
COL4A1-202ENST00000467182 STBD1O95210 358 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 CYP11B2P19099 503 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 MAP2K2P36507 400 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 AMPD3Q01432 767 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 DHX8Q14562 1220 aaKnown RBP14.52□□□□□ -0.09
COL4A1-202ENST00000467182 IQCB1Q15051 598 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 LY6KQ17RY6 165 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 KMT5BQ4FZB7 885 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 KCNV1Q6PIU1 500 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 MSL3Q8N5Y2 521 aaKnown RBP14.52□□□□□ -0.09
COL4A1-202ENST00000467182 RNF214Q8ND24 703 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 FAM200AQ8TCP9 573 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 TINF2Q9BSI4 451 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 ARHGAP39Q9C0H5 1083 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 ZSWIM4Q9H7M6 989 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 DNM3Q9UQ16 869 aa14.52□□□□□ -0.09
COL4A1-202ENST00000467182 GSTTP1A0A1W2PQM5 241 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 SORBS3O60504 671 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 RHOBTB3O94955 611 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 GGPS1O95749 300 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 TBC1D8O95759 1140 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 SUPT20HL2P0C7V6 817 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 CD44P16070 742 aaKnown RBP14.51□□□□□ -0.09
COL4A1-202ENST00000467182 QARSP47897 775 aaKnown RBP14.51□□□□□ -0.09
COL4A1-202ENST00000467182 LACTBP83111 547 aaPredicted RBP14.51□□□□□ -0.09
COL4A1-202ENST00000467182 EHHADHQ08426 723 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 NEDD9Q14511 834 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 METTL7BQ6UX53 244 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 GPBP1Q86WP2 473 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 CCDC60Q8IWA6 550 aaPredicted RBP14.51□□□□□ -0.09
COL4A1-202ENST00000467182 C4orf19Q8IY42 314 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 GIMAP8Q8ND71 665 aaPredicted RBP14.51□□□□□ -0.09
COL4A1-202ENST00000467182 PIGOQ8TEQ8 1089 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 DDX12PQ92771 950 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 COPS5Q92905 334 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 NACC1Q96RE7 527 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 BPIFA3Q9BQP9 254 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 LRRC27Q9C0I9 530 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 BHMT2Q9H2M3 363 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 RNF186Q9NXI6 227 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 SAMM50Q9Y512 469 aa14.51□□□□□ -0.09
COL4A1-202ENST00000467182 IGSF9BQ9UPX0 1349 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 NPHP3-ACAD11A0A0J9YXS1 232 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 PVALEFA0A1B0GWK0 134 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 FRMD3A2A2Y4 597 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 PPP1R3GB7ZBB8 358 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 TNPO2O14787 897 aaKnown RBP14.5□□□□□ -0.09
COL4A1-202ENST00000467182 ZNF862O60290 1169 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 CAVIN2O95810 425 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 PSAPP07602 524 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 PTGS1P23219 599 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 RGS2P41220 211 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 ZNF165P49910 485 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 MRE11P49959 708 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 PSMC5P62195 406 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 ASIC1P78348 528 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 CCL14Q16627 93 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 CELF3Q5SZQ8 465 aaKnown RBP14.5□□□□□ -0.09
COL4A1-202ENST00000467182 OLFML2BQ68BL8 750 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 RINT1Q6NUQ1 792 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 C1orf186Q6ZWK4 172 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 UNC13DQ70J99 1090 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 DYMQ7RTS9 669 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 DHX40Q8IX18 779 aaKnown RBP14.5□□□□□ -0.09
COL4A1-202ENST00000467182 SCFD2Q8WU76 684 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 SOCS4Q8WXH5 440 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 TRIM47Q96LD4 638 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 MED15Q96RN5 788 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 PCYT2Q99447 389 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 RUSC1Q9BVN2 902 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 SLC5A4Q9NY91 659 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 TCEAL9Q9UHQ7 104 aa14.5□□□□□ -0.09
COL4A1-202ENST00000467182 DBR1Q9UK59 544 aaKnown RBP14.5□□□□□ -0.09
COL4A1-202ENST00000467182 SSBP05455 408 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL4A1-202ENST00000467182 TXNP10599 105 aaKnown RBP14.49□□□□□ -0.09
COL4A1-202ENST00000467182 XRCC6P12956 609 aaKnown RBP eCLIP14.49□□□□□ -0.09
COL4A1-202ENST00000467182 ATP4AP20648 1035 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 FCGRTP55899 365 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 SP4Q02446 784 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 ARHGAP1Q07960 439 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 IRF5Q13568 498 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 GIT2Q14161 759 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 TTLL4Q14679 1199 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 ZNF658Q5TYW1 1059 aaPredicted RBP14.49□□□□□ -0.09
COL4A1-202ENST00000467182 SWSAP1Q6NVH7 229 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 LUZP1Q86V48 1076 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 SMYD4Q8IYR2 804 aaPredicted RBP14.49□□□□□ -0.09
COL4A1-202ENST00000467182 MLKLQ8NB16 471 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 GPR20Q99678 358 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 APBA2Q99767 749 aa14.49□□□□□ -0.09
COL4A1-202ENST00000467182 RMND1Q9NWS8 449 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms