RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 BLACEA4D250 179 aa6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 ZNF623O75123 536 aa6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 IL18BPO95998 194 aa6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 RANGAP1P46060 587 aaPredicted RBP6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 GLRBP48167 497 aa6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 YOD1Q5VVQ6 348 aaPredicted RBP6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 DPH6Q7L8W6 267 aa6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 SORCS2Q96PQ0 1159 aa6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 KRTAP17-1Q9BYP8 105 aa6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 IPPKQ9H8X2 491 aa6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 TCAF1Q9Y4C2 921 aa6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 TESMINQ9Y4I5 508 aa6.86□□□□□ -1.31
PRPF40A-205ENST00000467114 SH3RF2Q8TEC5 729 aa6.85□□□□□ -1.31
PRPF40A-205ENST00000467114 ZNF747Q9BV97 191 aa6.85□□□□□ -1.31
PRPF40A-205ENST00000467114 TRIM55Q9BYV6 548 aa6.85□□□□□ -1.31
PRPF40A-205ENST00000467114 OSBPL2Q9H1P3 480 aa6.85□□□□□ -1.31
PRPF40A-205ENST00000467114 SNTG2Q9NY99 539 aa6.85□□□□□ -1.31
PRPF40A-205ENST00000467114 TCRBV5S4A2TA0A5A2 114 aa6.84□□□□□ -1.31
PRPF40A-205ENST00000467114 H0Y858 1186 aa6.84□□□□□ -1.31
PRPF40A-205ENST00000467114 MUSKO15146 869 aa6.84□□□□□ -1.31
PRPF40A-205ENST00000467114 PDPK1O15530 556 aa6.84□□□□□ -1.31
PRPF40A-205ENST00000467114 ACVRL1P37023 503 aa6.84□□□□□ -1.31
PRPF40A-205ENST00000467114 GDF5P43026 501 aa6.84□□□□□ -1.31
PRPF40A-205ENST00000467114 PALM2Q8IXS6 379 aa6.84□□□□□ -1.31
PRPF40A-205ENST00000467114 ALG1Q9BT22 464 aa6.84□□□□□ -1.31
PRPF40A-205ENST00000467114 SCAND2PQ9GZW5 306 aaPredicted RBP6.84□□□□□ -1.31
PRPF40A-205ENST00000467114 PIF1Q9H611 641 aa6.84□□□□□ -1.31
PRPF40A-205ENST00000467114 PPP1R1BQ9UD71 204 aaPredicted RBP6.84□□□□□ -1.31
PRPF40A-205ENST00000467114 WNT9AO14904 365 aa6.83□□□□□ -1.32
PRPF40A-205ENST00000467114 DBPQ10586 325 aaPredicted RBP6.83□□□□□ -1.32
PRPF40A-205ENST00000467114 CCDC144BQ3MJ40 725 aa6.83□□□□□ -1.32
PRPF40A-205ENST00000467114 SPATC1Q76KD6 591 aa6.83□□□□□ -1.32
PRPF40A-205ENST00000467114 GPR155Q7Z3F1 870 aa6.83□□□□□ -1.32
PRPF40A-205ENST00000467114 PMFBP1Q8TBY8 1022 aa6.83□□□□□ -1.32
PRPF40A-205ENST00000467114 GNRHR2Q96P88 292 aa6.83□□□□□ -1.32
PRPF40A-205ENST00000467114 DEPDC7Q96QD5 511 aa6.83□□□□□ -1.32
PRPF40A-205ENST00000467114 LMF1Q96S06 567 aa6.83□□□□□ -1.32
PRPF40A-205ENST00000467114 TACO1Q9BSH4 297 aaKnown RBP6.83□□□□□ -1.32
PRPF40A-205ENST00000467114 CD244Q9BZW8 370 aa6.83□□□□□ -1.32
PRPF40A-205ENST00000467114 CYR61O00622 381 aa6.82□□□□□ -1.32
PRPF40A-205ENST00000467114 ADCY3O60266 1144 aa6.82□□□□□ -1.32
PRPF40A-205ENST00000467114 USP10Q14694 798 aaKnown RBP6.82□□□□□ -1.32
PRPF40A-205ENST00000467114 TCTN3Q6NUS6 607 aa6.82□□□□□ -1.32
PRPF40A-205ENST00000467114 IFNL2Q8IZJ0 200 aa6.82□□□□□ -1.32
PRPF40A-205ENST00000467114 NLGN4XQ8N0W4 816 aa6.82□□□□□ -1.32
PRPF40A-205ENST00000467114 SPATA9Q9BWV2 254 aa6.82□□□□□ -1.32
PRPF40A-205ENST00000467114 VPS11Q9H270 941 aa6.82□□□□□ -1.32
PRPF40A-205ENST00000467114 SRPK3Q9UPE1 567 aa6.82□□□□□ -1.32
PRPF40A-205ENST00000467114 CDK11AQ9UQ88 783 aaPredicted RBP6.82□□□□□ -1.32
PRPF40A-205ENST00000467114 TRAF6Q9Y4K3 522 aa6.82□□□□□ -1.32
PRPF40A-205ENST00000467114 FOXS1O43638 330 aa6.81□□□□□ -1.32
PRPF40A-205ENST00000467114 CUTAO60888 179 aa6.81□□□□□ -1.32
PRPF40A-205ENST00000467114 FZD7O75084 574 aa6.81□□□□□ -1.32
PRPF40A-205ENST00000467114 POLD1P28340 1107 aa6.81□□□□□ -1.32
PRPF40A-205ENST00000467114 PAK1Q13153 545 aa6.81□□□□□ -1.32
PRPF40A-205ENST00000467114 SPDYAQ5MJ70 313 aa6.81□□□□□ -1.32
PRPF40A-205ENST00000467114 MAMDC2Q7Z304 686 aaPredicted RBP6.81□□□□□ -1.32
PRPF40A-205ENST00000467114 CARD11Q9BXL7 1154 aa6.81□□□□□ -1.32
PRPF40A-205ENST00000467114 SLC39A2Q9NP94 309 aa6.81□□□□□ -1.32
PRPF40A-205ENST00000467114 AQP7O14520 342 aa6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 DIAPH1O60610 1272 aaKnown RBP6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 AMHP03971 560 aa6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 SLPIP03973 132 aa6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 ZNF888P0CJ79 500 aaPredicted RBP6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 PTPN1P18031 435 aaKnown RBP6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 TOP3AQ13472 1001 aaPredicted RBP6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 GPR19Q15760 415 aa6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 HS1BP3Q53T59 392 aa6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 BTBD8Q5XKL5 378 aa6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 SCUBE1Q8IWY4 988 aa6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 PTPRN2Q92932 1015 aa6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 NEIL1Q96FI4 390 aaPredicted RBP6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 PTPN22Q9Y2R2 807 aa6.8□□□□□ -1.32
PRPF40A-205ENST00000467114 FAM90A27PA6NNH2 459 aa6.79□□□□□ -1.32
PRPF40A-205ENST00000467114 U2SURPO15042 1029 aaKnown RBP6.79□□□□□ -1.32
PRPF40A-205ENST00000467114 DPP8Q6V1X1 898 aaPredicted RBP6.79□□□□□ -1.32
PRPF40A-205ENST00000467114 ARHGAP36Q6ZRI8 547 aa6.79□□□□□ -1.32
PRPF40A-205ENST00000467114 TAX1BP1Q86VP1 789 aa6.79□□□□□ -1.32
PRPF40A-205ENST00000467114 LILRB2Q8N423 598 aa6.79□□□□□ -1.32
PRPF40A-205ENST00000467114 PCDH19Q8TAB3 1148 aa6.79□□□□□ -1.32
PRPF40A-205ENST00000467114 LRRC37BQ96QE4 947 aa6.79□□□□□ -1.32
PRPF40A-205ENST00000467114 ZFR2Q9UPR6 939 aaKnown RBP6.79□□□□□ -1.32
PRPF40A-205ENST00000467114 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.78□□□□□ -1.32
PRPF40A-205ENST00000467114 MAN2B1O00754 1011 aa6.78□□□□□ -1.32
PRPF40A-205ENST00000467114 SUV39H1O43463 412 aa6.78□□□□□ -1.32
PRPF40A-205ENST00000467114 GIMAP8Q8ND71 665 aaPredicted RBP6.78□□□□□ -1.32
PRPF40A-205ENST00000467114 FBXW5Q969U6 566 aa6.78□□□□□ -1.32
PRPF40A-205ENST00000467114 TRBV23-1A0A0A0MS06 115 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 ESYT3A0FGR9 886 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 ARVCFO00192 962 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 AMY2AP04746 511 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 C6orf222P0C671 652 aaPredicted RBP6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 AMY2BP19961 511 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 HMGA2P52926 109 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 RAC3P60763 192 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 SUMO1P63165 101 aaKnown RBP6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 PRKD1Q15139 912 aaPredicted RBP6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 ZNF568Q3ZCX4 644 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 FIGNQ5HY92 759 aa6.77□□□□□ -1.33
PRPF40A-205ENST00000467114 FOXB2Q5VYV0 432 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms