RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 TMOD4Q9NZQ9 345 aa22.66■■□□□ 1.22
CCDC78-207ENST00000466708 DNAI1Q9UI46 699 aa22.66■■□□□ 1.22
CCDC78-207ENST00000466708 TRAF3IP3Q9Y228 551 aa22.66■■□□□ 1.22
CCDC78-207ENST00000466708 SSC5DA1L4H1 1573 aa22.66■■□□□ 1.22
CCDC78-207ENST00000466708 ATP2A1O14983 1001 aa22.66■■□□□ 1.22
CCDC78-207ENST00000466708 MRPS9P82933 396 aaKnown RBP22.66■■□□□ 1.22
CCDC78-207ENST00000466708 PGM5Q15124 567 aa22.66■■□□□ 1.22
CCDC78-207ENST00000466708 KNOP1Q1ED39 458 aaKnown RBP22.66■■□□□ 1.22
CCDC78-207ENST00000466708 SLC30A10Q6XR72 485 aa22.66■■□□□ 1.22
CCDC78-207ENST00000466708 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.66■■□□□ 1.22
CCDC78-207ENST00000466708 L2HGDHQ9H9P8 463 aa22.66■■□□□ 1.22
CCDC78-207ENST00000466708 AGO4Q9HCK5 861 aaKnown RBP22.66■■□□□ 1.22
CCDC78-207ENST00000466708 RNF146Q9NTX7 359 aa22.66■■□□□ 1.22
CCDC78-207ENST00000466708 RASSF10A6NK89 507 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 PDXKO00764 312 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 DHX15O43143 795 aaKnown RBP22.65■■□□□ 1.22
CCDC78-207ENST00000466708 MTMR1Q13613 665 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 MEA1Q16626 185 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 CCDC40Q4G0X9 1142 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 CATSPERGQ6ZRH7 1159 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 MIER3Q7Z3K6 550 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 RMDN3Q96TC7 470 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 PXMP2Q9NR77 195 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 ADARB2Q9NS39 739 aaKnown RBP22.65■■□□□ 1.22
CCDC78-207ENST00000466708 ZNHIT6Q9NWK9 470 aaKnown RBP22.65■■□□□ 1.22
CCDC78-207ENST00000466708 SEL1LQ9UBV2 794 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 SIK3Q9Y2K2 1263 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 MYPNQ86TC9 1320 aa22.65■■□□□ 1.22
CCDC78-207ENST00000466708 CETN3O15182 167 aa22.64■■□□□ 1.22
CCDC78-207ENST00000466708 RBM46Q8TBY0 533 aaKnown RBP22.64■■□□□ 1.22
CCDC78-207ENST00000466708 PDCD2LQ9BRP1 358 aa22.64■■□□□ 1.22
CCDC78-207ENST00000466708 LXNQ9BS40 222 aa22.64■■□□□ 1.22
CCDC78-207ENST00000466708 FAM184BQ9ULE4 1060 aa22.64■■□□□ 1.22
CCDC78-207ENST00000466708 ODF2LQ9ULJ1 636 aa22.64■■□□□ 1.22
CCDC78-207ENST00000466708 FZD1Q9UP38 647 aa22.64■■□□□ 1.22
CCDC78-207ENST00000466708 AFG3L2Q9Y4W6 797 aa22.64■■□□□ 1.22
CCDC78-207ENST00000466708 NKRFO15226 690 aaKnown RBP eCLIP22.64■■□□□ 1.21
CCDC78-207ENST00000466708 CALUO43852 315 aaPredicted RBP22.64■■□□□ 1.21
CCDC78-207ENST00000466708 FAM13AO94988 1023 aa22.64■■□□□ 1.21
CCDC78-207ENST00000466708 P4HBP07237 508 aaKnown RBP22.64■■□□□ 1.21
CCDC78-207ENST00000466708 EIF2AK2P19525 551 aaKnown RBP22.64■■□□□ 1.21
CCDC78-207ENST00000466708 ADAM9Q13443 819 aa22.64■■□□□ 1.21
CCDC78-207ENST00000466708 SH3D19Q5HYK7 790 aa22.64■■□□□ 1.21
CCDC78-207ENST00000466708 NSMFQ6X4W1 530 aa22.64■■□□□ 1.21
CCDC78-207ENST00000466708 MRPL44Q9H9J2 332 aaKnown RBP22.64■■□□□ 1.21
CCDC78-207ENST00000466708 HOXC10Q9NYD6 342 aa22.64■■□□□ 1.21
CCDC78-207ENST00000466708 POLR2AP24928 1970 aaKnown RBP22.63■■□□□ 1.21
CCDC78-207ENST00000466708 EIF3DO15371 548 aaKnown RBP eCLIP22.63■■□□□ 1.21
CCDC78-207ENST00000466708 USP2O75604 605 aaPredicted RBP22.63■■□□□ 1.21
CCDC78-207ENST00000466708 CASP5P51878 434 aa22.63■■□□□ 1.21
CCDC78-207ENST00000466708 ARHGEF16Q5VV41 709 aa22.63■■□□□ 1.21
CCDC78-207ENST00000466708 SNRNP48Q6IEG0 339 aaKnown RBP22.63■■□□□ 1.21
CCDC78-207ENST00000466708 TRIM59Q8IWR1 403 aa22.63■■□□□ 1.21
CCDC78-207ENST00000466708 WNK4Q96J92 1243 aa22.63■■□□□ 1.21
CCDC78-207ENST00000466708 EDEM3Q9BZQ6 932 aa22.63■■□□□ 1.21
CCDC78-207ENST00000466708 FHDC1Q9C0D6 1143 aaPredicted RBP22.63■■□□□ 1.21
CCDC78-207ENST00000466708 ZSWIM4Q9H7M6 989 aa22.63■■□□□ 1.21
CCDC78-207ENST00000466708 PARVGQ9HBI0 331 aa22.63■■□□□ 1.21
CCDC78-207ENST00000466708 ZNF214Q9UL59 606 aaPredicted RBP22.63■■□□□ 1.21
CCDC78-207ENST00000466708 COL11A1P12107 1806 aaPredicted RBP22.62■■□□□ 1.21
CCDC78-207ENST00000466708 RSPH10B2B2RC85 870 aa22.62■■□□□ 1.21
CCDC78-207ENST00000466708 RSPH10BP0C881 870 aa22.62■■□□□ 1.21
CCDC78-207ENST00000466708 GNG11P61952 73 aa22.62■■□□□ 1.21
CCDC78-207ENST00000466708 CDK17Q00537 523 aa22.62■■□□□ 1.21
CCDC78-207ENST00000466708 AGPAT5Q9NUQ2 364 aa22.62■■□□□ 1.21
CCDC78-207ENST00000466708 TYW1Q9NV66 732 aaKnown RBP22.62■■□□□ 1.21
CCDC78-207ENST00000466708 WRAP73Q9P2S5 460 aaPredicted RBP22.62■■□□□ 1.21
CCDC78-207ENST00000466708 RIPK3Q9Y572 518 aa22.62■■□□□ 1.21
CCDC78-207ENST00000466708 EPN1Q9Y6I3 576 aaPredicted RBP22.62■■□□□ 1.21
CCDC78-207ENST00000466708 DDNO94850 711 aaPredicted RBP22.61■■□□□ 1.21
CCDC78-207ENST00000466708 NDUFA10O95299 355 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 GUCY2CP25092 1073 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 KLK7P49862 253 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 ZNF131P52739 623 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 ITGB3BPQ13352 177 aaPredicted RBP22.61■■□□□ 1.21
CCDC78-207ENST00000466708 BAATQ14032 418 aaPredicted RBP22.61■■□□□ 1.21
CCDC78-207ENST00000466708 WDR59Q6PJI9 974 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 CHP1Q99653 195 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 TEX13BQ9BXU2 312 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 ARHGEF35A5YM69 484 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 DDX39AO00148 427 aaKnown RBP22.61■■□□□ 1.21
CCDC78-207ENST00000466708 MAFGO15525 162 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 LYPLA2O95372 231 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 SLU7O95391 586 aaKnown RBP22.61■■□□□ 1.21
CCDC78-207ENST00000466708 GCNT3O95395 438 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 MYBP10242 640 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 MYCLP12524 364 aaPredicted RBP22.61■■□□□ 1.21
CCDC78-207ENST00000466708 NR2F2P24468 414 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 CASQ1P31415 396 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 MAP3K9P80192 1104 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 PPP2R3AQ06190 1150 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 STXBP4Q6ZWJ1 553 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 CCDC170Q8IYT3 715 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 MYCT1Q8N699 235 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 BANK1Q8NDB2 785 aa22.61■■□□□ 1.21
CCDC78-207ENST00000466708 DCPSQ96C86 337 aaKnown RBP22.61■■□□□ 1.21
CCDC78-207ENST00000466708 DBR1Q9UK59 544 aaKnown RBP22.61■■□□□ 1.21
CCDC78-207ENST00000466708 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.61■■□□□ 1.21
CCDC78-207ENST00000466708 UBE4BO95155 1302 aa22.6■■□□□ 1.21
CCDC78-207ENST00000466708 ZBTB39O15060 712 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms