RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 TMEM260Q9NX78 707 aa6.34□□□□□ -1.39
LRCH3-211ENST00000466054 PTCH2Q9Y6C5 1203 aa6.34□□□□□ -1.39
LRCH3-211ENST00000466054 TRBV23-1A0A0A0MS06 115 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 PRODHO43272 600 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 KCNJ6P48051 423 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 GTF2A2P52657 109 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 SUMO1P63165 101 aaKnown RBP6.33□□□□□ -1.4
LRCH3-211ENST00000466054 DGCR2P98153 550 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 CYP4F3Q08477 520 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 TESK1Q15569 626 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 INF2Q27J81 1249 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 SLC35F1Q5T1Q4 408 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 ACBD5Q5T8D3 534 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-211ENST00000466054 DPY19L2P1Q6NXN4 242 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 C1orf210Q8IVY1 113 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 SYNPOQ8N3V7 929 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 NUDT10Q8NFP7 164 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 NPLOC4Q8TAT6 608 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 EDAQ92838 391 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 OSBP2Q969R2 916 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 NUDT11Q96G61 164 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 PLEKHG4BQ96PX9 1271 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 DHRS4Q9BTZ2 278 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 TMEFF2Q9UIK5 374 aaPredicted RBP6.33□□□□□ -1.4
LRCH3-211ENST00000466054 TNFRSF18Q9Y5U5 241 aa6.33□□□□□ -1.4
LRCH3-211ENST00000466054 MRPL42Q9Y6G3 142 aaKnown RBP6.33□□□□□ -1.4
LRCH3-211ENST00000466054 ENPP3O14638 875 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 DLX3O60479 287 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 FBXO21O94952 628 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 ECI1P42126 302 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 SQSTM1Q13501 440 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 SF1Q15637 639 aaKnown RBP6.32□□□□□ -1.4
LRCH3-211ENST00000466054 YOD1Q5VVQ6 348 aaPredicted RBP6.32□□□□□ -1.4
LRCH3-211ENST00000466054 STEAP3Q658P3 488 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 Q6ZUG5 572 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 HOMER1Q86YM7 354 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 TMEM145Q8NBT3 493 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 ARRDC4Q8NCT1 418 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 KREMEN2Q8NCW0 462 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 FRS2Q8WU20 508 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 C1orf159Q96HA4 380 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 EXOC2Q96KP1 924 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 SLC4A7Q9Y6M7 1214 aa6.32□□□□□ -1.4
LRCH3-211ENST00000466054 MEFVO15553 781 aaPredicted RBP6.31□□□□□ -1.4
LRCH3-211ENST00000466054 KCNAB2Q13303 367 aa6.31□□□□□ -1.4
LRCH3-211ENST00000466054 FOXB2Q5VYV0 432 aa6.31□□□□□ -1.4
LRCH3-211ENST00000466054 SDE2Q6IQ49 451 aa6.31□□□□□ -1.4
LRCH3-211ENST00000466054 GPR155Q7Z3F1 870 aa6.31□□□□□ -1.4
LRCH3-211ENST00000466054 APPBP2Q92624 585 aa6.31□□□□□ -1.4
LRCH3-211ENST00000466054 CHAMP1Q96JM3 812 aa6.31□□□□□ -1.4
LRCH3-211ENST00000466054 MRPS23Q9Y3D9 190 aaKnown RBP6.31□□□□□ -1.4
LRCH3-211ENST00000466054 X6R8D5 127 aa6.31□□□□□ -1.4
LRCH3-211ENST00000466054 ACO1P21399 889 aaKnown RBP6.3□□□□□ -1.4
LRCH3-211ENST00000466054 BCL6P41182 706 aa6.3□□□□□ -1.4
LRCH3-211ENST00000466054 FAM209AQ5JX71 171 aa6.3□□□□□ -1.4
LRCH3-211ENST00000466054 AGBL4Q5VU57 503 aa6.3□□□□□ -1.4
LRCH3-211ENST00000466054 VASNQ6EMK4 673 aa6.3□□□□□ -1.4
LRCH3-211ENST00000466054 RSPO2Q6UXX9 243 aaPredicted RBP6.3□□□□□ -1.4
LRCH3-211ENST00000466054 PPIL6Q8IXY8 311 aa6.3□□□□□ -1.4
LRCH3-211ENST00000466054 FAM89AQ96GI7 184 aa6.3□□□□□ -1.4
LRCH3-211ENST00000466054 NAF1Q96HR8 494 aaKnown RBP6.3□□□□□ -1.4
LRCH3-211ENST00000466054 KANSL2Q9H9L4 492 aa6.3□□□□□ -1.4
LRCH3-211ENST00000466054 TCRBV5S2A0A599 114 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 ESYT3A0FGR9 886 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 CDC45O75419 566 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 LRG1P02750 347 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 LTBRP36941 435 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 RAC3P60763 192 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 SMAD2Q15796 467 aaKnown RBP6.29□□□□□ -1.4
LRCH3-211ENST00000466054 PRSS53Q2L4Q9 553 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 MAMDC2Q7Z304 686 aaPredicted RBP6.29□□□□□ -1.4
LRCH3-211ENST00000466054 DCAF4Q8WV16 495 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 DIO2Q92813 273 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 ZFYVE21Q9BQ24 234 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 MRPL4Q9BYD3 311 aaKnown RBP6.29□□□□□ -1.4
LRCH3-211ENST00000466054 FANCLQ9NW38 375 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 NPFFR2Q9Y5X5 522 aa6.29□□□□□ -1.4
LRCH3-211ENST00000466054 MAFKO60675 156 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 DGKIO75912 1065 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 HSD3B2P26439 372 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 GABREP78334 506 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 TCEA2Q15560 299 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 PLEKHG4Q58EX7 1191 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 DENND5AQ6IQ26 1287 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 STYK1Q6J9G0 422 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 C16orf86Q6ZW13 317 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 MRGPRGQ86SM5 289 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 FUKQ8N0W3 1084 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 PTPRN2Q92932 1015 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 NEIL1Q96FI4 390 aaPredicted RBP6.28□□□□□ -1.4
LRCH3-211ENST00000466054 GPR27Q9NS67 375 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 MYOTQ9UBF9 498 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 CADPSQ9ULU8 1353 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 SHROOM4Q9ULL8 1493 aa6.28□□□□□ -1.4
LRCH3-211ENST00000466054 PLD2O14939 933 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 EFCAB14O75071 495 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 KLHL18O94889 574 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 CLSTN1O94985 981 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 C1SP09871 688 aa6.27□□□□□ -1.41
LRCH3-211ENST00000466054 C6orf222P0C671 652 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms