RNA–Protein interactions for RNA: ENST00000465892.6

TGFBR3-204, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-204ENST00000465892 DDX12PQ92771 950 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 IQCDQ96DY2 449 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 DYNLL2Q96FJ2 89 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.2■□□□□ 0.021e-6■□□□□ 8.7
TGFBR3-204ENST00000465892 SAMD15Q9P1V8 674 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 STX8Q9UNK0 236 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 SPDYE3A6NKU9 549 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 GHRP10912 638 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 EPS15P42566 896 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 ALDH5A1P51649 535 aaPredicted RBP15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 PLTPP55058 493 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 GRB10Q13322 594 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 MKRN4PQ13434 485 aaPredicted RBP15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 MTMR3Q13615 1198 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 ASIC2Q16515 512 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 CAPRIN2Q6IMN6 1127 aaKnown RBP15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 ZNF571Q7Z3V5 609 aaPredicted RBP15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 ERICH1Q86X53 443 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 SLC12A4Q9UP95 1085 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 UTP11Q9Y3A2 253 aaKnown RBP15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 COL4A3BPQ9Y5P4 624 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 MYH1P12882 1939 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 NAPAP54920 295 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 SLC8A3P57103 927 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 GRIK3Q13003 919 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 ZKSCAN8Q15776 578 aaPredicted RBP15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 THEMIS2Q5TEJ8 643 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 MAB21L3Q8N8X9 362 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 LARP4BQ92615 738 aaKnown RBP15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 FMO2Q99518 471 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 ARHGEF10LQ9HCE6 1279 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 INTS9Q9NV88 658 aaKnown RBP15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 TMEM260Q9NX78 707 aa15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.2■□□□□ 0.02
TGFBR3-204ENST00000465892 MYH4Q9Y623 1939 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 IGF2BP3O00425 579 aaKnown RBP eCLIP15.19■□□□□ 0.024e-7■□□□□ 10.6
TGFBR3-204ENST00000465892 FGGP02679 453 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 USP17L8P0C7I0 530 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 IRX1P78414 480 aaPredicted RBP15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 UNC13DQ70J99 1090 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 CUEDC2Q9H467 287 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 IL17RBQ9NRM6 502 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 FOXO6A8MYZ6 492 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 FGFR1OPO95684 399 aaKnown RBP15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 SLC9A1P19634 815 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 TRIM68Q6AZZ1 485 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 OTUD6AQ7L8S5 288 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 GUF1Q8N442 669 aaKnown RBP15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 TBCKQ8TEA7 893 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 TSG101Q99816 390 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 ZHX3Q9H4I2 956 aa15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 DBR1Q9UK59 544 aaKnown RBP15.19■□□□□ 0.02
TGFBR3-204ENST00000465892 SRCAPQ6ZRS2 3230 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 A0A0G2JS52 829 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 STXBP3O00186 592 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 ZNF211Q13398 564 aaPredicted RBP15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 SLC29A2Q14542 456 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 SUSD4Q5VX71 490 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 SPDYE1Q8NFV5 336 aaPredicted RBP15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 ATXN2LQ8WWM7 1075 aaKnown RBP15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 PIGBQ92521 554 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 PNMA5Q96PV4 448 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 ADAM7Q9H2U9 754 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 ECT2Q9H8V3 914 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 DCP1AQ9NPI6 582 aaPredicted RBP15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 SNX24Q9Y343 169 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 DUOX1Q9NRD9 1551 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 AP1G2O75843 785 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 KRT16P08779 473 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 ALKBH5Q6P6C2 394 aaKnown RBP15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 ACTRT1Q8TDG2 376 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 SPATS2LQ9NUQ6 558 aaKnown RBP15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 MCM9Q9NXL9 1143 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 NOP53Q9NZM5 478 aaKnown RBP15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 PNMA3Q9UL41 463 aa15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.18■□□□□ 0.02
TGFBR3-204ENST00000465892 SMCO2A6NFE2 343 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 IGHMBP2P38935 993 aaKnown RBP15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 LRRC63Q05C16 580 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 MARCH10Q8NA82 808 aaPredicted RBP15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 CCDC26Q8TAB7 109 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 EPS8L3Q8TE67 593 aaKnown RBP15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 TLCD1Q96CP7 247 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 SAAL1Q96ER3 474 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 L3MBTL3Q96JM7 780 aaPredicted RBP15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 PBKQ96KB5 322 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 MAD2L2Q9UI95 211 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 RGS16O15492 202 aaPredicted RBP15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 NQO1P15559 274 aaKnown RBP15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 FKBP3Q00688 224 aaKnown RBP15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 SNX1Q13596 522 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 PIGWQ7Z7B1 504 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 MYOCDQ8IZQ8 938 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 LRRC57Q8N9N7 239 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 SLC17A8Q8NDX2 589 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 RNF25Q96BH1 459 aaPredicted RBP15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 AK8Q96MA6 479 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 BRIP1Q9BX63 1249 aa15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 CNOT10Q9H9A5 744 aaKnown RBP15.17■□□□□ 0.02
TGFBR3-204ENST00000465892 OSGEPQ9NPF4 335 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms