RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 SLC9A7Q96T83 725 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 ZBED2Q9BTP6 218 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 NOC4LQ9BVI4 516 aaKnown RBP12.12□□□□□ -0.47
NPHP3-203ENST00000465756 TUBE1Q9UJT0 475 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 CYP3A7-CYP3A51PA0A087WV96 503 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 RSPH10B2B2RC85 870 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 SORBS3O60504 671 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 LGR5O75473 907 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 RSPH10BP0C881 870 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 ITGB5P18084 799 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 CYP3A7P24462 503 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 FOSBP53539 338 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 IKBKEQ14164 716 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 XKR3Q5GH77 459 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 LARP1BQ659C4 914 aaKnown RBP12.12□□□□□ -0.47
NPHP3-203ENST00000465756 GDF15Q99988 308 aa12.12□□□□□ -0.47
NPHP3-203ENST00000465756 AMHP03971 560 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 THPOP40225 353 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 FAAP100Q0VG06 881 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 GRIK4Q16099 956 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 BRAPQ7Z569 592 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 TCP11Q8WWU5 503 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 ABHD14A-ACY1A0A1B0GW23 586 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 HAS3O00219 553 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 TXLNAP40222 546 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 PSMC5P62195 406 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 EPHA7Q15375 998 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 ZNF697Q5TEC3 545 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 GPR153Q6NV75 609 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 CNKSR3Q6P9H4 555 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 RASSF8Q8NHQ8 419 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 RASGRP4Q8TDF6 673 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 ATP2B1P20020 1258 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 TBC1D8BQ0IIM8 1120 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 HSDL1Q3SXM5 330 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 TMX3Q96JJ7 454 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 SQORQ9Y6N5 450 aa12.11□□□□□ -0.47
NPHP3-203ENST00000465756 PHLPP2Q6ZVD8 1323 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 FRMPD3Q5JV73 1810 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 CD4P01730 458 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 STAG3L1P0CL83 205 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 FBXO18Q8NFZ0 1043 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 SLC5A5Q92911 643 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 FTHL17Q9BXU8 183 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 TRPV6Q9H1D0 765 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 PCDHA12Q9UN75 941 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 CHMP2AO43633 222 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 B4GALT4O60513 344 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 P4HBP07237 508 aaKnown RBP12.1□□□□□ -0.47
NPHP3-203ENST00000465756 ARP10275 920 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 IGBP1P78318 339 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 TTC38Q5R3I4 469 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 SWSAP1Q6NVH7 229 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 HACE1Q8IYU2 909 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 PHOSPHO2Q8TCD6 241 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 INTS4Q96HW7 963 aaKnown RBP12.1□□□□□ -0.47
NPHP3-203ENST00000465756 SLC26A4O43511 780 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 MARK3P27448 753 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 RBL2Q08999 1139 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 TFDP1Q14186 410 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 TYW1BQ6NUM6 668 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 KCTD17Q8N5Z5 321 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 ZSWIM4Q9H7M6 989 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 GABBR1Q9UBS5 961 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 TRPV2Q9Y5S1 764 aa12.1□□□□□ -0.47
NPHP3-203ENST00000465756 LRRC37A2A6NM11 1700 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 K7ELQ4 463 aaPredicted RBP12.09□□□□□ -0.47
NPHP3-203ENST00000465756 CTAGE5O15320 804 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 RFC5P40937 340 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 SLC7A3Q8WY07 619 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 RSPH1Q8WYR4 309 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 ZFP91Q96JP5 570 aaPredicted RBP12.09□□□□□ -0.47
NPHP3-203ENST00000465756 ZNF396Q96N95 335 aaPredicted RBP12.09□□□□□ -0.47
NPHP3-203ENST00000465756 MUTP22033 750 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 QARSP47897 775 aaKnown RBP12.09□□□□□ -0.47
NPHP3-203ENST00000465756 LRIT3Q3SXY7 679 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 NCAPH2Q6IBW4 605 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 CCDC34Q96HJ3 373 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 LRFN2Q9ULH4 789 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 COLQQ9Y215 455 aaPredicted RBP12.09□□□□□ -0.47
NPHP3-203ENST00000465756 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 SMIM35A0A1B0GVV1 85 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 DDX11L8A8MPP1 907 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 OR52Z1P0C646 297 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 CYP2C18P33260 490 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 SMAD3P84022 425 aaKnown RBP12.09□□□□□ -0.47
NPHP3-203ENST00000465756 NOSTRINQ8IVI9 506 aa12.09□□□□□ -0.47
NPHP3-203ENST00000465756 TSPYL2Q9H2G4 693 aaPredicted RBP12.09□□□□□ -0.47
NPHP3-203ENST00000465756 KIAA1217Q5T5P2 1943 aa12.08□□□□□ -0.47
NPHP3-203ENST00000465756 RGS20O76081 388 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 OATP04181 439 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 CCL23P55773 120 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 TRMT13Q9NUP7 481 aaKnown RBP12.08□□□□□ -0.48
NPHP3-203ENST00000465756 SEPT9Q9UHD8 586 aaPredicted RBP12.08□□□□□ -0.48
NPHP3-203ENST00000465756 VPS37CA5D8V6 355 aaPredicted RBP12.08□□□□□ -0.48
NPHP3-203ENST00000465756 ASAP2O43150 1006 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 HOXA2O43364 376 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 PPFIA3O75145 1194 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 SEC24BO95487 1268 aa12.08□□□□□ -0.48
NPHP3-203ENST00000465756 GJB2P29033 226 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms