RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 SORCS2Q96PQ0 1159 aa4.51□□□□□ -1.69
SNX4-202ENST00000465505 ZNF747Q9BV97 191 aa4.51□□□□□ -1.69
SNX4-202ENST00000465505 SCAND2PQ9GZW5 306 aaPredicted RBP4.51□□□□□ -1.69
SNX4-202ENST00000465505 TESMINQ9Y4I5 508 aa4.51□□□□□ -1.69
SNX4-202ENST00000465505 TACR2P21452 398 aa4.5□□□□□ -1.69
SNX4-202ENST00000465505 ACVRL1P37023 503 aa4.5□□□□□ -1.69
SNX4-202ENST00000465505 PALM2Q8IXS6 379 aa4.5□□□□□ -1.69
SNX4-202ENST00000465505 ZNF669Q96BR6 464 aaPredicted RBP4.5□□□□□ -1.69
SNX4-202ENST00000465505 GNRHR2Q96P88 292 aa4.5□□□□□ -1.69
SNX4-202ENST00000465505 TACO1Q9BSH4 297 aaKnown RBP4.5□□□□□ -1.69
SNX4-202ENST00000465505 SPATA9Q9BWV2 254 aa4.5□□□□□ -1.69
SNX4-202ENST00000465505 CD244Q9BZW8 370 aa4.5□□□□□ -1.69
SNX4-202ENST00000465505 SEMA4AQ9H3S1 761 aa4.5□□□□□ -1.69
SNX4-202ENST00000465505 SRRDQ9UH36 339 aa4.5□□□□□ -1.69
SNX4-202ENST00000465505 TCAF1Q9Y4C2 921 aa4.5□□□□□ -1.69
SNX4-202ENST00000465505 TRAF6Q9Y4K3 522 aa4.5□□□□□ -1.69
SNX4-202ENST00000465505 CLSPNQ9HAW4 1339 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 H0Y858 1186 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 WNT9AO14904 365 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 FOXS1O43638 330 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 AMHP03971 560 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 SELENOPP49908 381 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 DBPQ10586 325 aaPredicted RBP4.49□□□□□ -1.69
SNX4-202ENST00000465505 TCTN3Q6NUS6 607 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 SPATC1Q76KD6 591 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 DPH6Q7L8W6 267 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 GPR155Q7Z3F1 870 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 SCUBE1Q8IWY4 988 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 REXO1L1PQ8IX06 675 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 FAM177A1Q8N128 213 aaPredicted RBP4.49□□□□□ -1.69
SNX4-202ENST00000465505 LMF1Q96S06 567 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 ALG1Q9BT22 464 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 SLC39A2Q9NP94 309 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 PTPN22Q9Y2R2 807 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 MSRB2Q9Y3D2 182 aa4.49□□□□□ -1.69
SNX4-202ENST00000465505 FAM90A27PA6NNH2 459 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 MUSKO15146 869 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 ADCY3O60266 1144 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 ZNF888P0CJ79 500 aaPredicted RBP4.48□□□□□ -1.69
SNX4-202ENST00000465505 NCLP19338 710 aaKnown RBP4.48□□□□□ -1.69
SNX4-202ENST00000465505 POLD1P28340 1107 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 GDF5P43026 501 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 PAK1Q13153 545 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 SPDYAQ5MJ70 313 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 BTBD8Q5XKL5 378 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 ARHGAP36Q6ZRI8 547 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 PCDH19Q8TAB3 1148 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 CCDC136Q96JN2 1154 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 IGSF5Q9NSI5 407 aa4.48□□□□□ -1.69
SNX4-202ENST00000465505 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.47□□□□□ -1.69
SNX4-202ENST00000465505 ESYT3A0FGR9 886 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 CYR61O00622 381 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 AQP7O14520 342 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 MAFGO15525 162 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 SLPIP03973 132 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 AMY2AP04746 511 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 PTPN1P18031 435 aaKnown RBP4.47□□□□□ -1.69
SNX4-202ENST00000465505 AMY2BP19961 511 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 TOP3AQ13472 1001 aaPredicted RBP4.47□□□□□ -1.69
SNX4-202ENST00000465505 USP10Q14694 798 aaKnown RBP4.47□□□□□ -1.69
SNX4-202ENST00000465505 GPR19Q15760 415 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 FOXB2Q5VYV0 432 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 TMED8Q6PL24 325 aaPredicted RBP4.47□□□□□ -1.69
SNX4-202ENST00000465505 TAX1BP1Q86VP1 789 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 OSTM1Q86WC4 334 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 NLGN4XQ8N0W4 816 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 PTPRN2Q92932 1015 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 LRRC37BQ96QE4 947 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 CARD11Q9BXL7 1154 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 VPS11Q9H270 941 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 SRPK3Q9UPE1 567 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 ZFR2Q9UPR6 939 aaKnown RBP4.47□□□□□ -1.69
SNX4-202ENST00000465505 PCDHA8Q9Y5H6 950 aa4.47□□□□□ -1.69
SNX4-202ENST00000465505 MAN2B1O00754 1011 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 PDPK1O15530 556 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 CUTAO60888 179 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 FZD7O75084 574 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 C6orf222P0C671 652 aaPredicted RBP4.46□□□□□ -1.7
SNX4-202ENST00000465505 PDE6AP16499 860 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 FAM209AQ5JX71 171 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 DPP8Q6V1X1 898 aaPredicted RBP4.46□□□□□ -1.7
SNX4-202ENST00000465505 C16orf59Q7L2K0 433 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 MAMDC2Q7Z304 686 aaPredicted RBP4.46□□□□□ -1.7
SNX4-202ENST00000465505 ZFPM1Q8IX07 1006 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 IFNL2Q8IZJ0 200 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 ZBTB38Q8NAP3 1195 aaPredicted RBP4.46□□□□□ -1.7
SNX4-202ENST00000465505 GIMAP8Q8ND71 665 aaPredicted RBP4.46□□□□□ -1.7
SNX4-202ENST00000465505 NEIL1Q96FI4 390 aaPredicted RBP4.46□□□□□ -1.7
SNX4-202ENST00000465505 TRIM55Q9BYV6 548 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 PRDM16Q9HAZ2 1276 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 RIC8BQ9NVN3 520 aa4.46□□□□□ -1.7
SNX4-202ENST00000465505 TRBV23-1A0A0A0MS06 115 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 ARVCFO00192 962 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 PLSCR1O15162 318 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 SUV39H1O43463 412 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 HMGA2P52926 109 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 RASGRF1Q13972 1273 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 RNF151Q2KHN1 245 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 AGBL4Q5VU57 503 aa4.45□□□□□ -1.7
SNX4-202ENST00000465505 FBXW5Q969U6 566 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms