RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 IGKV6D-21A0A0A0MT36 114 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 C17orf102A2RUQ5 167 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 EML1O00423 815 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 TREHO43280 583 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 TIMP1P01033 207 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 GCFC2P16383 781 aaKnown RBP13.17□□□□□ -0.3
CUX1-207ENST00000465461 ATP4AP20648 1035 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 U2AF2P26368 475 aaKnown RBP eCLIP13.17□□□□□ -0.3
CUX1-207ENST00000465461 TOB1P50616 345 aaPredicted RBP13.17□□□□□ -0.3
CUX1-207ENST00000465461 IGBP1P78318 339 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 KRT76Q01546 638 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 PTPN11Q06124 597 aaPredicted RBP13.17□□□□□ -0.3
CUX1-207ENST00000465461 PLCB4Q15147 1175 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 UGCGQ16739 394 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 TRAPPC12Q8WVT3 735 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 SCLYQ96I15 445 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 GDF15Q99988 308 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 LBHD1Q9BQE6 289 aaPredicted RBP13.17□□□□□ -0.3
CUX1-207ENST00000465461 NOC4LQ9BVI4 516 aaKnown RBP13.17□□□□□ -0.3
CUX1-207ENST00000465461 HIPK3Q9H422 1215 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 DISC1Q9NRI5 854 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 ERAP1Q9NZ08 941 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 TCEAL9Q9UHQ7 104 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 TRIP12Q14669 1992 aaPredicted RBP13.17□□□□□ -0.3
CUX1-207ENST00000465461 LTBP2Q14767 1821 aa13.17□□□□□ -0.3
CUX1-207ENST00000465461 DNAH12Q6ZR08 3092 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 VPS37CA5D8V6 355 aaPredicted RBP13.16□□□□□ -0.3
CUX1-207ENST00000465461 PSAPP07602 524 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 TXKP42681 527 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 EPHB4P54760 987 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 CALCRLQ16602 461 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 TTC38Q5R3I4 469 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 PDXDC2PQ6P474 469 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 B3GNT9Q6UX72 402 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 PLPPR4Q7Z2D5 763 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 MIER3Q7Z3K6 550 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 FERMT3Q86UX7 667 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 LMBR1Q8WVP7 490 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 ATP6V0A1Q93050 837 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 NAP1L4Q99733 375 aaKnown RBP13.16□□□□□ -0.3
CUX1-207ENST00000465461 SEZ6LQ9BYH1 1024 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 WNT8AQ9H1J5 351 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 VAV3Q9UKW4 847 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 TRPC6Q9Y210 931 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 PCDHB6Q9Y5E3 794 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 PCDHA10Q9Y5I2 948 aa13.16□□□□□ -0.3
CUX1-207ENST00000465461 WDR64B1ANS9 1081 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 NEMFO60524 1076 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 ACRP10323 421 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 INSRRP14616 1297 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 CSF2RAP15509 400 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 PPFIA1Q13136 1202 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 GRIK4Q16099 956 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 FAM160B1Q5W0V3 765 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 NCAPH2Q6IBW4 605 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 RUFY4Q6ZNE9 571 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 CKAP2LQ8IYA6 745 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 SMAP1Q8IYB5 467 aaPredicted RBP13.15□□□□□ -0.3
CUX1-207ENST00000465461 BANK1Q8NDB2 785 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 AFAP1L1Q8TED9 768 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 INTS4Q96HW7 963 aaKnown RBP13.15□□□□□ -0.3
CUX1-207ENST00000465461 FAM20AQ96MK3 541 aa13.15□□□□□ -0.3
CUX1-207ENST00000465461 UBE2OQ9C0C9 1292 aaKnown RBP13.15□□□□□ -0.3
CUX1-207ENST00000465461 MAFBQ9Y5Q3 323 aaPredicted RBP13.15□□□□□ -0.3
CUX1-207ENST00000465461 POTEB3A0JP26 581 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 TBX3O15119 743 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 ZNF862O60290 1169 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 BAG4O95429 457 aaKnown RBP13.14□□□□□ -0.31
CUX1-207ENST00000465461 SYT1P21579 422 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 HOXC8P31273 242 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 JAK3P52333 1124 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 ADAM17P78536 824 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 TRIM71Q2Q1W2 868 aaKnown RBP13.14□□□□□ -0.31
CUX1-207ENST00000465461 MARCH8Q5T0T0 291 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 MFSD5Q6N075 450 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 POTEBQ6S5H4 581 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 MTMR9Q96QG7 549 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 SH2D3AQ9BRG2 576 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 PRO3102Q9H379 93 aa13.14□□□□□ -0.31
CUX1-207ENST00000465461 TTC12Q9H892 705 aaPredicted RBP13.14□□□□□ -0.31
CUX1-207ENST00000465461 NOL7Q9UMY1 257 aaKnown RBP13.14□□□□□ -0.31
CUX1-207ENST00000465461 NRCAMQ92823 1304 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 HSP90AA1P07900 732 aaKnown RBP13.13□□□□□ -0.31
CUX1-207ENST00000465461 CKBP12277 381 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 SFNP31947 248 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 THPOP40225 353 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 FPGSQ05932 587 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 SPIRE1Q08AE8 756 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 PTK7Q13308 1070 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 PPP2R5CQ13362 524 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 C9orf50Q5SZB4 431 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 FOXD4L5Q5VV16 416 aaPredicted RBP13.13□□□□□ -0.31
CUX1-207ENST00000465461 C16orf59Q7L2K0 433 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 DEFB128Q7Z7B8 93 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 SERINC5Q86VE9 423 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 SLFN12Q8IYM2 578 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 C4orf32Q8N8J7 132 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 RETREG2Q8NC44 543 aa13.13□□□□□ -0.31
CUX1-207ENST00000465461 ATP8B4Q8TF62 1192 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms