RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ANP32BQ92688 251 aaKnown RBP15.69■□□□□ 0.1
HDAC6-215ENST00000465457 WNT8BQ93098 351 aa15.69■□□□□ 0.1
HDAC6-215ENST00000465457 RAD9AQ99638 391 aa15.69■□□□□ 0.1
HDAC6-215ENST00000465457 PHF20Q9BVI0 1012 aa15.69■□□□□ 0.1
HDAC6-215ENST00000465457 NUP62CLQ9H1M0 184 aa15.69■□□□□ 0.1
HDAC6-215ENST00000465457 TSPY26PQ9H489 355 aa15.69■□□□□ 0.1
HDAC6-215ENST00000465457 CEP131Q9UPN4 1083 aa15.69■□□□□ 0.1
HDAC6-215ENST00000465457 A6NJR5 290 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 SPTLC2O15270 562 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 PPP6R2O75170 966 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 BMP15O95972 392 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 IRS1P35568 1242 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 KRT2P35908 639 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 MBTPS1Q14703 1052 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 ADALQ6DHV7 355 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 GALNT17Q6IS24 598 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.68■□□□□ 0.1
HDAC6-215ENST00000465457 FAM160B2Q86V87 743 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 SRBD1Q8N5C6 995 aaKnown RBP15.68■□□□□ 0.1
HDAC6-215ENST00000465457 FBXO22Q8NEZ5 403 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 CCDC148Q8NFR7 591 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 AFAP1L1Q8TED9 768 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 GMCL1Q96IK5 515 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 SPZ1Q9BXG8 430 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 MUTYHQ9UIF7 546 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 MTMR7Q9Y216 660 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 V9GY48 417 aaPredicted RBP15.68■□□□□ 0.1
HDAC6-215ENST00000465457 MYH7BA7E2Y1 1941 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 MYH6P13533 1939 aa15.68■□□□□ 0.1
HDAC6-215ENST00000465457 PALM3A6NDB9 673 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-215ENST00000465457 C19orf67A6NJJ6 358 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 hCG_1984214I3L0E3 225 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 CXCL10P02778 98 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 PARP1P09874 1014 aaKnown RBP15.67■□□□□ 0.1
HDAC6-215ENST00000465457 FDX1P10109 184 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 SELPP16109 830 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 FAM160A1Q05DH4 1040 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 SLC39A14Q15043 492 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 PKN1Q16512 942 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 ASPRV1Q53RT3 343 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 TCEAL5Q5H9L2 206 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 IER5LQ5T953 404 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 TRAF7Q6Q0C0 670 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 EP400NLQ6ZTU2 488 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 GAS2L3Q86XJ1 694 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 CCDC82Q8N4S0 544 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 ZNF713Q8N859 430 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-215ENST00000465457 CCDC12Q8WUD4 166 aaPredicted RBP15.67■□□□□ 0.1
HDAC6-215ENST00000465457 MRPS27Q92552 414 aaKnown RBP15.67■□□□□ 0.1
HDAC6-215ENST00000465457 PGBD1Q96JS3 809 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 KCNH6Q9H252 994 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 CLSTN2Q9H4D0 955 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 SYNPO2Q9UMS6 1093 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 NOL7Q9UMY1 257 aaKnown RBP15.67■□□□□ 0.1
HDAC6-215ENST00000465457 CACNA1AO00555 2505 aa15.67■□□□□ 0.1
HDAC6-215ENST00000465457 PLXNA3P51805 1871 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 CKBP12277 381 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 SLC16A2P36021 539 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 CEBPZQ03701 1054 aaKnown RBP15.66■□□□□ 0.1
HDAC6-215ENST00000465457 PTPN11Q06124 597 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-215ENST00000465457 CLUL1Q15846 466 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 TTBK2Q6IQ55 1244 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 CAGE1Q8TC20 777 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 CHURC1Q8WUH1 139 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 KAT2BQ92831 832 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 MRPL38Q96DV4 380 aaKnown RBP15.66■□□□□ 0.1
HDAC6-215ENST00000465457 TNMDQ9H2S6 317 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.66■□□□□ 0.1
HDAC6-215ENST00000465457 GJB4Q9NTQ9 266 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 MAD2L2Q9UI95 211 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 COL4A6Q14031 1691 aa15.66■□□□□ 0.1
HDAC6-215ENST00000465457 ZFHX2Q9C0A1 2572 aaPredicted RBP15.66■□□□□ 0.1
HDAC6-215ENST00000465457 CAVIN2O95810 425 aa15.65■□□□□ 0.1
HDAC6-215ENST00000465457 ICAM1P05362 532 aa15.65■□□□□ 0.1
HDAC6-215ENST00000465457 CCDC192P0DO97 292 aa15.65■□□□□ 0.1
HDAC6-215ENST00000465457 XRCC6P12956 609 aaKnown RBP eCLIP15.65■□□□□ 0.1
HDAC6-215ENST00000465457 TRAPPC10P48553 1259 aa15.65■□□□□ 0.1
HDAC6-215ENST00000465457 MKRN4PQ13434 485 aaPredicted RBP15.65■□□□□ 0.1
HDAC6-215ENST00000465457 RBM43Q6ZSC3 357 aaKnown RBP15.65■□□□□ 0.1
HDAC6-215ENST00000465457 CMTR1Q8N1G2 835 aaKnown RBP15.65■□□□□ 0.1
HDAC6-215ENST00000465457 DACT1Q9NYF0 836 aa15.65■□□□□ 0.1
HDAC6-215ENST00000465457 CLIC4Q9Y696 253 aa15.65■□□□□ 0.1
HDAC6-215ENST00000465457 DCHS1Q96JQ0 3298 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 BTBD18B2RXH4 712 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 KINO60870 393 aaKnown RBP15.64■□□□□ 0.09
HDAC6-215ENST00000465457 CUTAO60888 179 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 MMP3P08254 477 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 TXNP10599 105 aaKnown RBP15.64■□□□□ 0.09
HDAC6-215ENST00000465457 LIG1P18858 919 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 LTBRP36941 435 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 DLX2Q07687 328 aaPredicted RBP15.64■□□□□ 0.09
HDAC6-215ENST00000465457 RBL2Q08999 1139 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 COL19A1Q14993 1142 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 GPATCH4Q5T3I0 446 aaKnown RBP15.64■□□□□ 0.09
HDAC6-215ENST00000465457 ADHFE1Q8IWW8 467 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 BANK1Q8NDB2 785 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 AFG1LQ8WV93 481 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 CLEC4DQ8WXI8 215 aa15.64■□□□□ 0.09
HDAC6-215ENST00000465457 PABPC5Q96DU9 382 aaKnown RBP15.64■□□□□ 0.09
HDAC6-215ENST00000465457 RANBP17Q9H2T7 1088 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms