RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 FXR1P51114 621 aaKnown RBP eCLIP19.26■□□□□ 0.67
VPS52-215ENST00000464425 KRT76Q01546 638 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 PPFIA1Q13136 1202 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 BECN1Q14457 450 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 SAFBQ15424 915 aaKnown RBP eCLIP19.26■□□□□ 0.67
VPS52-215ENST00000464425 LRCH2Q5VUJ6 765 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 ZNF746Q6NUN9 644 aaPredicted RBP19.26■□□□□ 0.67
VPS52-215ENST00000464425 PLPPR4Q7Z2D5 763 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 DEFB128Q7Z7B8 93 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 CCDC155Q8N6L0 562 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 CAGE1Q8TC20 777 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 LMBR1Q8WVP7 490 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 RIT2Q99578 217 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.26■□□□□ 0.673e-8■■■□□ 16.3
VPS52-215ENST00000464425 IL23AQ9NPF7 189 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 TRPC6Q9Y210 931 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 SAMM50Q9Y512 469 aa19.26■□□□□ 0.67
VPS52-215ENST00000464425 TRIP12Q14669 1992 aaPredicted RBP19.25■□□□□ 0.67
VPS52-215ENST00000464425 IGKV6D-21A0A0A0MT36 114 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 SOX1O00570 391 aaPredicted RBP19.25■□□□□ 0.67
VPS52-215ENST00000464425 CKBP12277 381 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 GJB2P29033 226 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 THPOP40225 353 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 IGBP1P78318 339 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 PLCB4Q15147 1175 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 GRIK4Q16099 956 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 TMEM240Q5SV17 173 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 FAM160B1Q5W0V3 765 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 PPP4R3AQ6IN85 833 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 ZNF365Q70YC5 407 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 SERINC5Q86VE9 423 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 CCDC60Q8IWA6 550 aaPredicted RBP19.25■□□□□ 0.67
VPS52-215ENST00000464425 FBXO18Q8NFZ0 1043 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 ETNPPLQ8TBG4 499 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 RNPC3Q96LT9 517 aaKnown RBP19.25■□□□□ 0.67
VPS52-215ENST00000464425 TEKT3Q9BXF9 490 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 ZNF302Q9NR11 478 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 PCDHA10Q9Y5I2 948 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 NRCAMQ92823 1304 aa19.25■□□□□ 0.67
VPS52-215ENST00000464425 RBAK-RBAKDNI3L0D1 243 aa19.24■□□□□ 0.67
VPS52-215ENST00000464425 PSMD10O75832 226 aa19.24■□□□□ 0.67
VPS52-215ENST00000464425 PSAPP07602 524 aa19.24■□□□□ 0.67
VPS52-215ENST00000464425 INSRRP14616 1297 aa19.24■□□□□ 0.67
VPS52-215ENST00000464425 SELPP16109 830 aa19.24■□□□□ 0.67
VPS52-215ENST00000464425 TRIM71Q2Q1W2 868 aaKnown RBP19.24■□□□□ 0.67
VPS52-215ENST00000464425 PDXDC2PQ6P474 469 aa19.24■□□□□ 0.67
VPS52-215ENST00000464425 TRMT1LQ7Z2T5 733 aaKnown RBP19.24■□□□□ 0.67
VPS52-215ENST00000464425 SMAP1Q8IYB5 467 aaPredicted RBP19.24■□□□□ 0.67
VPS52-215ENST00000464425 RPUSD2Q8IZ73 545 aaKnown RBP19.24■□□□□ 0.67
VPS52-215ENST00000464425 AFAP1L1Q8TED9 768 aa19.24■□□□□ 0.67
VPS52-215ENST00000464425 UNC45AQ9H3U1 944 aa19.24■□□□□ 0.67
VPS52-215ENST00000464425 DISC1Q9NRI5 854 aa19.24■□□□□ 0.67
VPS52-215ENST00000464425 POTEB3A0JP26 581 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 WDR64B1ANS9 1081 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 MARCH6O60337 910 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 FGBP02675 491 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 GCFC2P16383 781 aaKnown RBP19.23■□□□□ 0.67
VPS52-215ENST00000464425 ATP2B1P20020 1258 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 ADAM17P78536 824 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 LRIT3Q3SXY7 679 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 ZNF618Q5T7W0 954 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 POTEBQ6S5H4 581 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 LRRC8DQ7L1W4 858 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 CKAP2LQ8IYA6 745 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 VWCEQ96DN2 955 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 ZBTB10Q96DT7 871 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 LRCH3Q96II8 777 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 NAP1L4Q99733 375 aaKnown RBP19.23■□□□□ 0.67
VPS52-215ENST00000464425 GABBR1Q9UBS5 961 aa19.23■□□□□ 0.67
VPS52-215ENST00000464425 SLC26A2P50443 739 aa19.22■□□□□ 0.67
VPS52-215ENST00000464425 GNL2Q13823 731 aaKnown RBP19.22■□□□□ 0.67
VPS52-215ENST00000464425 MARCH8Q5T0T0 291 aa19.22■□□□□ 0.67
VPS52-215ENST00000464425 PSRC1Q6PGN9 363 aaPredicted RBP19.22■□□□□ 0.67
VPS52-215ENST00000464425 RUFY4Q6ZNE9 571 aa19.22■□□□□ 0.67
VPS52-215ENST00000464425 OTOP2Q7RTS6 562 aa19.22■□□□□ 0.67
VPS52-215ENST00000464425 POTEDQ86YR6 584 aa19.22■□□□□ 0.67
VPS52-215ENST00000464425 TRAPPC12Q8WVT3 735 aa19.22■□□□□ 0.67
VPS52-215ENST00000464425 FTOQ9C0B1 505 aaKnown RBP eCLIP19.22■□□□□ 0.67
VPS52-215ENST00000464425 KCNMB3Q9NPA1 279 aa19.22■□□□□ 0.67
VPS52-215ENST00000464425 RRN3P2A6NIE6 340 aa19.21■□□□□ 0.67
VPS52-215ENST00000464425 WNT7AO00755 349 aa19.21■□□□□ 0.67
VPS52-215ENST00000464425 HSP90AA1P07900 732 aaKnown RBP19.21■□□□□ 0.67
VPS52-215ENST00000464425 ATP4AP20648 1035 aa19.21■□□□□ 0.67
VPS52-215ENST00000464425 RFC2P35250 354 aa19.21■□□□□ 0.67
VPS52-215ENST00000464425 RBL2Q08999 1139 aa19.21■□□□□ 0.67
VPS52-215ENST00000464425 MIER3Q7Z3K6 550 aa19.21■□□□□ 0.67
VPS52-215ENST00000464425 ATP8B4Q8TF62 1192 aa19.21■□□□□ 0.67
VPS52-215ENST00000464425 KAT6AQ92794 2004 aa19.21■□□□□ 0.67
VPS52-215ENST00000464425 HAS1Q92839 578 aa19.21■□□□□ 0.67
VPS52-215ENST00000464425 TNPO1Q92973 898 aaKnown RBP19.21■□□□□ 0.67
VPS52-215ENST00000464425 FAM20AQ96MK3 541 aa19.21■□□□□ 0.67
VPS52-215ENST00000464425 FOXP1Q9H334 677 aaPredicted RBP19.21■□□□□ 0.67
VPS52-215ENST00000464425 TUBE1Q9UJT0 475 aa19.21■□□□□ 0.67
VPS52-215ENST00000464425 MAFBQ9Y5Q3 323 aaPredicted RBP19.21■□□□□ 0.67
VPS52-215ENST00000464425 CTSHP09668 335 aa19.2■□□□□ 0.66
VPS52-215ENST00000464425 PDCP20941 246 aa19.2■□□□□ 0.66
VPS52-215ENST00000464425 SFNP31947 248 aa19.2■□□□□ 0.66
VPS52-215ENST00000464425 JAK3P52333 1124 aa19.2■□□□□ 0.66
VPS52-215ENST00000464425 GPNMBQ14956 572 aa19.2■□□□□ 0.66
VPS52-215ENST00000464425 TRAF7Q6Q0C0 670 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms