RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 CRELD2Q6UXH1 353 aaPredicted RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 USP49Q70CQ1 688 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 MAATS1Q7Z4T9 603 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 CERS3Q8IU89 383 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 TEX11Q8IYF3 940 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 NBPF15Q8N660 670 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 TTLL11Q8NHH1 800 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 CCDC26Q8TAB7 109 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 MYCBPAPQ8TBZ2 947 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 NANOS1Q8WY41 292 aaKnown RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 KAT2BQ92831 832 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 TNFRSF25Q93038 417 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 CENPTQ96BT3 561 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 HOOK2Q96ED9 719 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 CALML4Q96GE6 196 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 CNOT6LQ96LI5 555 aaKnown RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 CCDC43Q96MW1 224 aaKnown RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 ZIM3Q96PE6 472 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 C7orf25Q9BPX7 421 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 JPH2Q9BR39 696 aaPredicted RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 BRIP1Q9BX63 1249 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 TAF1DQ9H5J8 278 aaPredicted RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 RIC8AQ9NPQ8 531 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 KBTBD4Q9NVX7 518 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 VPS54Q9P1Q0 977 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 LRWD1Q9UFC0 647 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 MCM8Q9UJA3 840 aa7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 ZNF330Q9Y3S2 320 aaPredicted RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 BZW2Q9Y6E2 419 aaKnown RBP7.9□□□□□ -1.14
CLSTN1-204ENST00000464286 COL18A1P39060 1754 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 ADAMTSL3P82987 1691 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 LRP5O75197 1615 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 KCPQ6ZWJ8 1503 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 TNS2Q63HR2 1409 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 A0A087X0B3 334 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 B4DLN1 442 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 E7EVH7 732 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 PPP1R12AO14974 1030 aaPredicted RBP7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 SRGAP2O75044 1071 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 RASSF9O75901 435 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 HEXIM1O94992 359 aaKnown RBP7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 LUC7L3O95232 432 aaKnown RBP7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 SERPING1P05155 500 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 ITGA6P23229 1130 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 PDCLQ13371 301 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 KIAA0753Q2KHM9 967 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 ODF2Q5BJF6 829 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 TTMPQ5BVD1 217 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 MSL1Q68DK7 614 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 CC2D2BQ6DHV5 1058 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 KCNV1Q6PIU1 500 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 VPS36Q86VN1 386 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 C2CD5Q86YS7 1000 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 CCDC13Q8IYE1 715 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 SMYD4Q8IYR2 804 aaPredicted RBP7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 BLIDQ8IZY5 108 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 SYCE1Q8N0S2 351 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 GBP7Q8N8V2 638 aaPredicted RBP7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 DAGLBQ8NCG7 672 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 RIN2Q8WYP3 895 aaPredicted RBP7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 ZKSCAN4Q969J2 545 aaPredicted RBP7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 NAP1L3Q99457 506 aaPredicted RBP7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 ISCUQ9H1K1 167 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 BLZF1Q9H2G9 400 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 PLEKHA4Q9H4M7 779 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 SLITRK6Q9H5Y7 841 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 TMBIM4Q9HC24 238 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 FAM114A2Q9NRY5 505 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 LRP2BPQ9P2M1 347 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 TRIM10Q9UDY6 481 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 PCDHA4Q9UN74 947 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 DIS3Q9Y2L1 958 aaKnown RBP7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 CASZ1Q86V15 1759 aa7.89□□□□□ -1.15
CLSTN1-204ENST00000464286 C1orf167Q5SNV9 1468 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 MYH1P12882 1939 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 C5orf60A6NFR6 353 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 PDE2AO00408 941 aaPredicted RBP7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 SART1O43290 800 aaKnown RBP7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 ORC4O43929 436 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 TRIM37O94972 964 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 CDC25AP30304 524 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 GBP2P32456 591 aaPredicted RBP7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 RNF144AP50876 292 aaPredicted RBP7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 PPP2R2AP63151 447 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 GUCY2DQ02846 1103 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 IFT88Q13099 833 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 XRCC4Q13426 336 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 RIPK1Q13546 671 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 ITIH4Q14624 930 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 PKN1Q16512 942 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 CCDC38Q502W7 563 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 SFMBT2Q5VUG0 894 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 CYB5D1Q6P9G0 228 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 C6orf89Q6UWU4 347 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 PIK3AP1Q6ZUJ8 805 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 KRT25Q7Z3Z0 450 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 CPLX4Q7Z7G2 160 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 IRF2BP1Q8IU81 584 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 VGLL2Q8N8G2 317 aa7.88□□□□□ -1.15
CLSTN1-204ENST00000464286 ZCRB1Q8TBF4 217 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms