RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 MRFAP1L1Q96HT8 127 aa5.99□□□□□ -1.45
USH2A-203ENST00000463147 SNTG2Q9NY99 539 aa5.99□□□□□ -1.45
USH2A-203ENST00000463147 PRKAG3Q9UGI9 489 aa5.99□□□□□ -1.45
USH2A-203ENST00000463147 WASF3Q9UPY6 502 aa5.99□□□□□ -1.45
USH2A-203ENST00000463147 A0A087X1B8 175 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 H0Y858 1186 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 SMAD7O15105 426 aaKnown RBP5.98□□□□□ -1.45
USH2A-203ENST00000463147 ITGAVP06756 1048 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 HSD3B2P26439 372 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 KCNJ6P48051 423 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 ZMAT1Q5H9K5 638 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 PROSER1Q86XN7 944 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 CARD11Q9BXL7 1154 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 PDGFDQ9GZP0 370 aaPredicted RBP5.98□□□□□ -1.45
USH2A-203ENST00000463147 AURKAIP1Q9NWT8 199 aaPredicted RBP5.98□□□□□ -1.45
USH2A-203ENST00000463147 SIRPGQ9P1W8 387 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 ARHGAP20Q9P2F6 1191 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 FBXL7Q9UJT9 491 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 SLC30A1Q9Y6M5 507 aa5.98□□□□□ -1.45
USH2A-203ENST00000463147 SV2CQ496J9 727 aa5.97□□□□□ -1.45
USH2A-203ENST00000463147 C1orf210Q8IVY1 113 aa5.97□□□□□ -1.45
USH2A-203ENST00000463147 FUKQ8N0W3 1084 aa5.97□□□□□ -1.45
USH2A-203ENST00000463147 LILRB2Q8N423 598 aa5.97□□□□□ -1.45
USH2A-203ENST00000463147 SRPK1Q96SB4 655 aaKnown RBP5.97□□□□□ -1.45
USH2A-203ENST00000463147 IKZF4Q9H2S9 585 aa5.97□□□□□ -1.45
USH2A-203ENST00000463147 KCND1Q9NSA2 647 aa5.97□□□□□ -1.45
USH2A-203ENST00000463147 ZFP69BQ9UJL9 534 aa5.97□□□□□ -1.45
USH2A-203ENST00000463147 ARNTLO00327 626 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 CKMP06732 381 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 FAHP16930 419 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 ACO1P21399 889 aaKnown RBP5.96□□□□□ -1.46
USH2A-203ENST00000463147 GFRA1P56159 465 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 SKIDA1Q1XH10 827 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 ZNF227Q86WZ6 799 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 MICAL1Q8TDZ2 1067 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 EXTL1Q92935 676 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 SCYL1Q96KG9 808 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 DEPDC7Q96QD5 511 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 MSRB2Q9Y3D2 182 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 NPFFR2Q9Y5X5 522 aa5.96□□□□□ -1.46
USH2A-203ENST00000463147 ENPP3O14638 875 aa5.95□□□□□ -1.46
USH2A-203ENST00000463147 ADH4P08319 380 aa5.95□□□□□ -1.46
USH2A-203ENST00000463147 CR2P20023 1033 aa5.95□□□□□ -1.46
USH2A-203ENST00000463147 NANOS3P60323 173 aaKnown RBP5.95□□□□□ -1.46
USH2A-203ENST00000463147 PAN2Q504Q3 1202 aaKnown RBP5.95□□□□□ -1.46
USH2A-203ENST00000463147 DPP8Q6V1X1 898 aaPredicted RBP5.95□□□□□ -1.46
USH2A-203ENST00000463147 GPR155Q7Z3F1 870 aa5.95□□□□□ -1.46
USH2A-203ENST00000463147 DNAJC10Q8IXB1 793 aa5.95□□□□□ -1.46
USH2A-203ENST00000463147 TRIM55Q9BYV6 548 aa5.95□□□□□ -1.46
USH2A-203ENST00000463147 MAKP20794 623 aa5.94□□□□□ -1.46
USH2A-203ENST00000463147 ACRV1P26436 265 aa5.94□□□□□ -1.46
USH2A-203ENST00000463147 POLD1P28340 1107 aa5.94□□□□□ -1.46
USH2A-203ENST00000463147 RPS19P39019 145 aaKnown RBP5.94□□□□□ -1.46
USH2A-203ENST00000463147 MAMDC4Q6UXC1 1216 aa5.94□□□□□ -1.46
USH2A-203ENST00000463147 STPG3Q8N7X2 389 aa5.94□□□□□ -1.46
USH2A-203ENST00000463147 NEU4Q8WWR8 484 aaPredicted RBP5.94□□□□□ -1.46
USH2A-203ENST00000463147 PLEKHG4BQ96PX9 1271 aa5.94□□□□□ -1.46
USH2A-203ENST00000463147 ST7Q9NRC1 585 aa5.94□□□□□ -1.46
USH2A-203ENST00000463147 GPR27Q9NS67 375 aa5.94□□□□□ -1.46
USH2A-203ENST00000463147 RBPJLQ9UBG7 517 aa5.94□□□□□ -1.46
USH2A-203ENST00000463147 OAZ3Q9UMX2 235 aa5.94□□□□□ -1.46
USH2A-203ENST00000463147 CCDC85CA6NKD9 419 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 SLC27A2O14975 620 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 LCP1P13796 627 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 GLRBP48167 497 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 GRIN1Q05586 938 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 SPIRE1Q08AE8 756 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 PTPROQ16827 1216 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 RSPO2Q6UXX9 243 aaPredicted RBP5.93□□□□□ -1.46
USH2A-203ENST00000463147 PIP4K2CQ8TBX8 421 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 CLEC4DQ8WXI8 215 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 KCTD13Q8WZ19 329 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 DNAJC7Q99615 494 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 PRRX2Q99811 253 aa5.93□□□□□ -1.46
USH2A-203ENST00000463147 AGRPO00253 132 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 TGM1P22735 817 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 PFKPQ01813 784 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 MAP4K2Q12851 820 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 TUSC3Q13454 348 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 TUBA3CQ13748 450 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 PRSS53Q2L4Q9 553 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 SLC35F1Q5T1Q4 408 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 CD276Q5ZPR3 534 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 IGFL4Q6B9Z1 124 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 TUBA3EQ6PEY2 450 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 Q6ZSN1 163 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 OTOP3Q7RTS5 596 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 LRP10Q7Z4F1 713 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 TMEM145Q8NBT3 493 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 UHMK1Q8TAS1 419 aaKnown RBP5.92□□□□□ -1.46
USH2A-203ENST00000463147 SH3TC2Q8TF17 1288 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 CACTINQ8WUQ7 758 aaKnown RBP5.92□□□□□ -1.46
USH2A-203ENST00000463147 ZG16BQ96DA0 208 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 CRAMP1Q96RY5 1269 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 CCDC113Q9H0I3 377 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 EPN3Q9H201 632 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 WDR26Q9H7D7 661 aa5.92□□□□□ -1.46
USH2A-203ENST00000463147 ZNF839A8K0R7 811 aa5.91□□□□□ -1.46
USH2A-203ENST00000463147 U2SURPO15042 1029 aaKnown RBP5.91□□□□□ -1.46
USH2A-203ENST00000463147 TBX1O43435 398 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms