RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 UBIAD1Q9Y5Z9 338 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 ZHX2Q9Y6X8 837 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 SBF1O95248 1867 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 FRMPD4Q14CM0 1322 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 A0A1W2PQJ5 194 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 PRPF6O94906 941 aaKnown RBP11.25□□□□□ -0.61
MSH5-211ENST00000463144 ARHGAP25P42331 645 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 ZBED6P86452 979 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 ITGB3BPQ13352 177 aaPredicted RBP11.25□□□□□ -0.61
MSH5-211ENST00000463144 TKFCQ3LXA3 575 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 PCNX4Q63HM2 1172 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 ARHGAP27Q6ZUM4 889 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 REPS2Q8NFH8 660 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 KLRG1Q96E93 195 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 PCMTD1Q96MG8 357 aaPredicted RBP11.25□□□□□ -0.61
MSH5-211ENST00000463144 TRERF1Q96PN7 1200 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 RIT2Q99578 217 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 PKD2L1Q9P0L9 805 aa11.25□□□□□ -0.61
MSH5-211ENST00000463144 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.25□□□□□ -0.61
MSH5-211ENST00000463144 V9GYY5 206 aaPredicted RBP11.25□□□□□ -0.61
MSH5-211ENST00000463144 DDX39AO00148 427 aaKnown RBP11.24□□□□□ -0.61
MSH5-211ENST00000463144 ZBED4O75132 1171 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 URI1O94763 535 aaPredicted RBP11.24□□□□□ -0.61
MSH5-211ENST00000463144 NDUFA10O95299 355 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 MUTP22033 750 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 CASQ1P31415 396 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 HMGCS2P54868 508 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 MARSP56192 900 aaKnown RBP11.24□□□□□ -0.61
MSH5-211ENST00000463144 ADAM9Q13443 819 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 KNOP1Q1ED39 458 aaKnown RBP11.24□□□□□ -0.61
MSH5-211ENST00000463144 DLK2Q6UY11 383 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 NIPA1Q7RTP0 329 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 KRT26Q7Z3Y9 468 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 GPC2Q8N158 579 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 JADE2Q9NQC1 790 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 PICK1Q9NRD5 415 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 KIF20AO95235 890 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 EIF2AK2P19525 551 aaKnown RBP11.24□□□□□ -0.61
MSH5-211ENST00000463144 KCNA1Q09470 495 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 BMT2Q1RMZ1 405 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 EDRF1Q3B7T1 1238 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 CCDC40Q4G0X9 1142 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 TRIM59Q8IWR1 403 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 BANK1Q8NDB2 785 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 SMCR8Q8TEV9 937 aaPredicted RBP11.24□□□□□ -0.61
MSH5-211ENST00000463144 ERO1AQ96HE7 468 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 C12orf42Q96LP6 360 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 NACC1Q96RE7 527 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 AS3MTQ9HBK9 375 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 AGO4Q9HCK5 861 aaKnown RBP11.24□□□□□ -0.61
MSH5-211ENST00000463144 MAP3K20Q9NYL2 800 aaKnown RBP11.24□□□□□ -0.61
MSH5-211ENST00000463144 ADAMTS5Q9UNA0 930 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 TRAF3IP3Q9Y228 551 aa11.24□□□□□ -0.61
MSH5-211ENST00000463144 LMNB1P20700 586 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 MAP3K9P80192 1104 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 PGM5Q15124 567 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 SAMD3Q8N6K7 520 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 FIZ1Q96SL8 496 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 LXNQ9BS40 222 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 IKZF4Q9H2S9 585 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 MMRN2Q9H8L6 949 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 OLFML3Q9NRN5 406 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 FAM207AQ9NSI2 230 aaPredicted RBP11.23□□□□□ -0.61
MSH5-211ENST00000463144 FDX1P10109 184 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 HNRNPH3P31942 346 aaKnown RBP11.23□□□□□ -0.61
MSH5-211ENST00000463144 HERVK_113P62684 666 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 TSR1Q2NL82 804 aaKnown RBP11.23□□□□□ -0.61
MSH5-211ENST00000463144 PPP4R3CPQ6ZMV5 832 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 RNF207Q6ZRF8 634 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 PDCD2LQ9BRP1 358 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 NHEJ1Q9H9Q4 299 aaPredicted RBP11.23□□□□□ -0.61
MSH5-211ENST00000463144 TFR2Q9UP52 801 aa11.23□□□□□ -0.61
MSH5-211ENST00000463144 CTDP1Q9Y5B0 961 aaPredicted RBP11.23□□□□□ -0.61
MSH5-211ENST00000463144 ASTN1O14525 1302 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 CETN3O15182 167 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 TGFB1I1O43294 461 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 ATP9AO75110 1047 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 TBCAO75347 108 aaKnown RBP11.22□□□□□ -0.61
MSH5-211ENST00000463144 NOL4O94818 638 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 GCNT3O95395 438 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 GNA14O95837 355 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 GAP43P17677 238 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 NR2F2P24468 414 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 NMT1P30419 496 aaKnown RBP11.22□□□□□ -0.61
MSH5-211ENST00000463144 DSG3P32926 999 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 PRKG1Q13976 671 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 BAATQ14032 418 aaPredicted RBP11.22□□□□□ -0.61
MSH5-211ENST00000463144 ZNF569Q5MCW4 686 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 NSMFQ6X4W1 530 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 MIER3Q7Z3K6 550 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 BAP1Q92560 729 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 RMDN3Q96TC7 470 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 PXMP2Q9NR77 195 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 RNF146Q9NTX7 359 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 TRIM10Q9UDY6 481 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 ZNF214Q9UL59 606 aaPredicted RBP11.22□□□□□ -0.61
MSH5-211ENST00000463144 PLAGL2Q9UPG8 496 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 AFG3L2Q9Y4W6 797 aa11.22□□□□□ -0.61
MSH5-211ENST00000463144 ZMYM2Q9UBW7 1377 aa11.21□□□□□ -0.61
MSH5-211ENST00000463144 C19orf81C9J6K1 198 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms