RNA–Protein interactions for RNA: ENST00000463066.1

HLA-DPA1-245, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 580 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-245ENST00000463066 ZNF215Q9UL58 517 aaPredicted RBP18.82■□□□□ 0.6
HLA-DPA1-245ENST00000463066 SYT1P21579 422 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 CHRDL2Q6WN34 429 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TRMT1LQ7Z2T5 733 aaKnown RBP18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 FERMT3Q86UX7 667 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TRAPPC12Q8WVT3 735 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 FAM20AQ96MK3 541 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 SEZ6LQ9BYH1 1024 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 AZI2Q9H6S1 392 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 ZNF302Q9NR11 478 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 ERAP1Q9NZ08 941 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 GABBR1Q9UBS5 961 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 SAMM50Q9Y512 469 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PCDHA10Q9Y5I2 948 aa18.81■□□□□ 0.6
HLA-DPA1-245ENST00000463066 C17orf102A2RUQ5 167 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 WDR64B1ANS9 1081 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TREHO43280 583 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 MARCH6O60337 910 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 NEMFO60524 1076 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PSAPP07602 524 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 RAG1P15918 1043 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 HOXC8P31273 242 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 EPHB4P54760 987 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 CCL23P55773 120 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 IGBP1P78318 339 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PPFIA1Q13136 1202 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 CALCRLQ16602 461 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PDXDC2PQ6P474 469 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 MIER3Q7Z3K6 550 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 LMBR1Q8WVP7 490 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 MTMR9Q96QG7 549 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 GDF15Q99988 308 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 WNT8AQ9H1J5 351 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 HIPK3Q9H422 1215 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TCEAL9Q9UHQ7 104 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 NOD1Q9Y239 953 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PCDHB6Q9Y5E3 794 aa18.8■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TBX3O15119 743 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 ZNF862O60290 1169 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TIMP1P01033 207 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 INSRRP14616 1297 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TXKP42681 527 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 SPIRE1Q08AE8 756 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 GRIK4Q16099 956 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 FAM160B1Q5W0V3 765 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PLPPR4Q7Z2D5 763 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 SMAP1Q8IYB5 467 aaPredicted RBP18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 AFAP1L1Q8TED9 768 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 NOL7Q9UMY1 257 aaKnown RBP18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TRPC6Q9Y210 931 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 COLQQ9Y215 455 aaPredicted RBP18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 DNAH12Q6ZR08 3092 aa18.79■□□□□ 0.6
HLA-DPA1-245ENST00000463066 JAK3P52333 1124 aa18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 ADAM17P78536 824 aa18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TRIM71Q2Q1W2 868 aaKnown RBP18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 MARCH8Q5T0T0 291 aa18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 NCAPH2Q6IBW4 605 aa18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 RUFY4Q6ZNE9 571 aa18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 C4orf32Q8N8J7 132 aa18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 ATP6V0A1Q93050 837 aa18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 SCLYQ96I15 445 aa18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 LBHD1Q9BQE6 289 aaPredicted RBP18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 MTMR6Q9Y217 621 aa18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 MAFBQ9Y5Q3 323 aaPredicted RBP18.78■□□□□ 0.6
HLA-DPA1-245ENST00000463066 IGSF9BQ9UPX0 1349 aa18.77■□□□□ 0.6
HLA-DPA1-245ENST00000463066 POTEB3A0JP26 581 aa18.77■□□□□ 0.6
HLA-DPA1-245ENST00000463066 BAG4O95429 457 aaKnown RBP18.77■□□□□ 0.6
HLA-DPA1-245ENST00000463066 TRAPPC10P48553 1259 aa18.77■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PPP2R5CQ13362 524 aa18.77■□□□□ 0.6
HLA-DPA1-245ENST00000463066 FAM173BQ6P4H8 233 aa18.77■□□□□ 0.6
HLA-DPA1-245ENST00000463066 POTEBQ6S5H4 581 aa18.77■□□□□ 0.6
HLA-DPA1-245ENST00000463066 SERINC5Q86VE9 423 aa18.77■□□□□ 0.6
HLA-DPA1-245ENST00000463066 BANK1Q8NDB2 785 aa18.77■□□□□ 0.6
HLA-DPA1-245ENST00000463066 ATP8B4Q8TF62 1192 aa18.77■□□□□ 0.6
HLA-DPA1-245ENST00000463066 PRO3102Q9H379 93 aa18.77■□□□□ 0.6
HLA-DPA1-245ENST00000463066 LTBP2Q14767 1821 aa18.77■□□□□ 0.59
HLA-DPA1-245ENST00000463066 TMEM150BA6NC51 233 aa18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 STBD1O95210 358 aa18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 OR52Z1P0C646 297 aa18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 CSF2RAP15509 400 aa18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 PDCP20941 246 aa18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 SFNP31947 248 aa18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 RESTQ13127 1097 aa18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 PTK7Q13308 1070 aa18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 CKAP2LQ8IYA6 745 aa18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 SLFN12Q8IYM2 578 aa18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 VWCEQ96DN2 955 aa18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 TTC12Q9H892 705 aaPredicted RBP18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 WRAP73Q9P2S5 460 aaPredicted RBP18.76■□□□□ 0.59
HLA-DPA1-245ENST00000463066 POTEMA6NI47 508 aa18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 ZBTB42B2RXF5 422 aa18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 HSP90AA1P07900 732 aaKnown RBP18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 ACRP10323 421 aa18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 PRKCEQ02156 737 aa18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 FOXD4L5Q5VV16 416 aaPredicted RBP18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 MFSD5Q6N075 450 aa18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 TRAF7Q6Q0C0 670 aa18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 RDM1Q8NG50 284 aa18.75■□□□□ 0.59
HLA-DPA1-245ENST00000463066 FOXD4L4Q8WXT5 416 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms