RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 KCNK18Q7Z418 384 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 ELOA2Q8IYF1 753 aaPredicted RBP16.09■□□□□ 0.17
COL6A1-202ENST00000463060 PDILTQ8N807 584 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 PPTC7Q8NI37 304 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 SPATA33Q96N06 139 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 BLOC1S4Q9NUP1 217 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 CCDC39Q9UFE4 941 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 USP25Q9UHP3 1055 aa16.09■□□□□ 0.17
COL6A1-202ENST00000463060 MAFBQ9Y5Q3 323 aaPredicted RBP16.09■□□□□ 0.17
COL6A1-202ENST00000463060 POTEB3A0JP26 581 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 A6NJR5 290 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 CTAGE5O15320 804 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 ZNF862O60290 1169 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 DUSP11O75319 330 aaKnown RBP16.08■□□□□ 0.16
COL6A1-202ENST00000463060 SLFN14P0C7P3 912 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 CCND3P30281 292 aaPredicted RBP16.08■□□□□ 0.16
COL6A1-202ENST00000463060 MDM2Q00987 491 aaPredicted RBP16.08■□□□□ 0.16
COL6A1-202ENST00000463060 CYP4A11Q02928 519 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 CTTNQ14247 550 aaKnown RBP16.08■□□□□ 0.16
COL6A1-202ENST00000463060 UGCGQ16739 394 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 RRAGBQ5VZM2 374 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 SWSAP1Q6NVH7 229 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 POTEBQ6S5H4 581 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 KRBA2Q6ZNG9 492 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 SH3RF1Q7Z6J0 888 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 CCDC60Q8IWA6 550 aaPredicted RBP16.08■□□□□ 0.16
COL6A1-202ENST00000463060 IQUBQ8NA54 791 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 AFAP1L1Q8TED9 768 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 CALML4Q96GE6 196 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 MTRQ99707 1265 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 PYM1Q9BRP8 204 aaKnown RBP16.08■□□□□ 0.16
COL6A1-202ENST00000463060 NT5C3AQ9H0P0 336 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 SERTAD1Q9UHV2 236 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 KIAA1024Q9UPX6 916 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 KDM3AQ9Y4C1 1321 aa16.08■□□□□ 0.16
COL6A1-202ENST00000463060 DYNC1LI2O43237 492 aaPredicted RBP16.07■□□□□ 0.16
COL6A1-202ENST00000463060 PPFIA4O75335 1185 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 INHAP05111 366 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 ATP4AP20648 1035 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 QARSP47897 775 aaKnown RBP16.07■□□□□ 0.16
COL6A1-202ENST00000463060 LBX1P52954 281 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 GJA9P57773 515 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 PSMC5P62195 406 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 PSMC6P62333 389 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 MIS18BP1Q6P0N0 1132 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 POTEGQ6S5H5 508 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 TPH2Q8IWU9 490 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 C4orf19Q8IY42 314 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 BANK1Q8NDB2 785 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 AFG1LQ8WV93 481 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 LENG1Q96BZ8 264 aaPredicted RBP16.07■□□□□ 0.16
COL6A1-202ENST00000463060 DHX58Q96C10 678 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 PLIN2Q99541 437 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 LXNQ9BS40 222 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 UPF3AQ9H1J1 476 aaKnown RBP16.07■□□□□ 0.16
COL6A1-202ENST00000463060 CUEDC2Q9H467 287 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 ZSWIM4Q9H7M6 989 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 DDX19AQ9NUU7 478 aaKnown RBP16.07■□□□□ 0.16
COL6A1-202ENST00000463060 KBTBD4Q9NVX7 518 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 TMEM63CQ9P1W3 806 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 STK17AQ9UEE5 414 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 TCEAL9Q9UHQ7 104 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 SAMM50Q9Y512 469 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 IGSF9BQ9UPX0 1349 aa16.07■□□□□ 0.16
COL6A1-202ENST00000463060 EMSYQ7Z589 1322 aa16.06■□□□□ 0.16
COL6A1-202ENST00000463060 ZBTB39O15060 712 aa16.06■□□□□ 0.16
COL6A1-202ENST00000463060 XRCC6P12956 609 aaKnown RBP eCLIP16.06■□□□□ 0.16
COL6A1-202ENST00000463060 TCF7P36402 384 aaPredicted RBP16.06■□□□□ 0.16
COL6A1-202ENST00000463060 SP4Q02446 784 aa16.06■□□□□ 0.16
COL6A1-202ENST00000463060 PLPPR4Q7Z2D5 763 aa16.06■□□□□ 0.16
COL6A1-202ENST00000463060 CTU1Q7Z7A3 348 aaKnown RBP16.06■□□□□ 0.16
COL6A1-202ENST00000463060 OR6J1Q8NGC5 347 aa16.06■□□□□ 0.16
COL6A1-202ENST00000463060 RAD54LQ92698 747 aa16.06■□□□□ 0.16
COL6A1-202ENST00000463060 CLSTN2Q9H4D0 955 aa16.06■□□□□ 0.16
COL6A1-202ENST00000463060 GABBR1Q9UBS5 961 aa16.06■□□□□ 0.16
COL6A1-202ENST00000463060 A0A087WWV3 80 aa16.05■□□□□ 0.16
COL6A1-202ENST00000463060 E9PMD0 336 aa16.05■□□□□ 0.16
COL6A1-202ENST00000463060 KINO60870 393 aaKnown RBP16.05■□□□□ 0.16
COL6A1-202ENST00000463060 EYA4O95677 639 aa16.05■□□□□ 0.16
COL6A1-202ENST00000463060 STAT6P42226 847 aa16.05■□□□□ 0.16
COL6A1-202ENST00000463060 IRX5P78411 483 aaPredicted RBP16.05■□□□□ 0.16
COL6A1-202ENST00000463060 TLK2Q86UE8 772 aa16.05■□□□□ 0.16
COL6A1-202ENST00000463060 NACC1Q96RE7 527 aa16.05■□□□□ 0.16
COL6A1-202ENST00000463060 C16orf70Q9BSU1 422 aa16.05■□□□□ 0.16
COL6A1-202ENST00000463060 DNM3Q9UQ16 869 aa16.05■□□□□ 0.16
COL6A1-202ENST00000463060 NOP56O00567 594 aaKnown RBP16.04■□□□□ 0.16
COL6A1-202ENST00000463060 ADAMTS4O75173 837 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 MMP3P08254 477 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 STAT5BP51692 787 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 SLC12A3P55017 1021 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 MCM6Q14566 821 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
COL6A1-202ENST00000463060 LHX8Q68G74 356 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 KANK3Q6NY19 840 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 RBM43Q6ZSC3 357 aaKnown RBP16.04■□□□□ 0.16
COL6A1-202ENST00000463060 ANO5Q75V66 913 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 SYT2Q8N9I0 419 aaPredicted RBP16.04■□□□□ 0.16
COL6A1-202ENST00000463060 CNNM3Q8NE01 707 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 PIGOQ8TEQ8 1089 aa16.04■□□□□ 0.16
COL6A1-202ENST00000463060 SH3TC2Q8TF17 1288 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms