RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 SPATA31C1P0DKV0 1188 aa18.63■□□□□ 0.57
ACTB-207ENST00000462494 ASIC2Q16515 512 aa18.63■□□□□ 0.57
ACTB-207ENST00000462494 EDRF1Q3B7T1 1238 aa18.63■□□□□ 0.57
ACTB-207ENST00000462494 MOXD1Q6UVY6 613 aa18.63■□□□□ 0.57
ACTB-207ENST00000462494 PPP4R3CPQ6ZMV5 832 aa18.63■□□□□ 0.57
ACTB-207ENST00000462494 TMEM179Q6ZVK1 233 aa18.63■□□□□ 0.57
ACTB-207ENST00000462494 SND1Q7KZF4 910 aaKnown RBP eCLIP18.63■□□□□ 0.572e-17■□□□□ 9.8
ACTB-207ENST00000462494 COL23A1Q86Y22 540 aaPredicted RBP18.63■□□□□ 0.57
ACTB-207ENST00000462494 QTRT2Q9H974 415 aaKnown RBP18.63■□□□□ 0.57
ACTB-207ENST00000462494 A0A087X0T9 212 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 PRPF6O94906 941 aaKnown RBP18.62■□□□□ 0.57
ACTB-207ENST00000462494 FTCDO95954 541 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 FAM228BP0C875 321 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 MYBP10242 640 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 KLRC1P26715 233 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 RPA1P27694 616 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 ZNF76P36508 570 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 ITIH3Q06033 890 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 SLC18A3Q16572 532 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 KIAA0753Q2KHM9 967 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 Q4G0T1 1027 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 SYDE2Q5VT97 1194 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 SYT2Q8N9I0 419 aaPredicted RBP18.62■□□□□ 0.57
ACTB-207ENST00000462494 CRYGNQ8WXF5 182 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 RBM12Q9NTZ6 932 aaKnown RBP18.62■□□□□ 0.57
ACTB-207ENST00000462494 SLC26A4O43511 780 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 MMP10P09238 476 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 KNOP1Q1ED39 458 aaKnown RBP18.62■□□□□ 0.57
ACTB-207ENST00000462494 MUM1L1Q5H9M0 696 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 TATDN1Q6P1N9 297 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 SPICE1Q8N0Z3 855 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 CYP2W1Q8TAV3 490 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 AFAP1L1Q8TED9 768 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 AENQ8WTP8 325 aaKnown RBP18.62■□□□□ 0.57
ACTB-207ENST00000462494 LENG9Q96B70 501 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 IDI2Q9BXS1 227 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 PACSIN1Q9BY11 444 aa18.62■□□□□ 0.57
ACTB-207ENST00000462494 ARMCX3Q9UH62 379 aaPredicted RBP18.62■□□□□ 0.57
ACTB-207ENST00000462494 ZC3H4Q9UPT8 1303 aaKnown RBP18.62■□□□□ 0.57
ACTB-207ENST00000462494 RSPH10B2B2RC85 870 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 RSPH10BP0C881 870 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 SLC9A1P19634 815 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 NAB2Q15742 525 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 CFAP221Q4G0U5 840 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 DCAF17Q5H9S7 520 aaPredicted RBP18.61■□□□□ 0.57
ACTB-207ENST00000462494 C8orf74Q6P047 294 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 KRT27Q7Z3Y8 459 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 GANQ9H2C0 597 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 BHMT2Q9H2M3 363 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 PACSIN2Q9UNF0 486 aaPredicted RBP18.61■□□□□ 0.57
ACTB-207ENST00000462494 SIPA1L1O43166 1804 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 GOLGA6BA6NDN3 693 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 TBX3O15119 743 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 MSH4O15457 936 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 ECE2O60344 883 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 GH2P01242 217 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 SREBF1P36956 1147 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 DACT2Q5SW24 774 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 STRIP1Q5VSL9 837 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 TCERG1LQ5VWI1 586 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 MSL1Q68DK7 614 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 ZC3H3Q8IXZ2 948 aaKnown RBP18.61■□□□□ 0.57
ACTB-207ENST00000462494 BCAS3Q9H6U6 928 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 TDRD3Q9H7E2 651 aaKnown RBP18.61■□□□□ 0.57
ACTB-207ENST00000462494 AIPL1Q9NZN9 384 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 CWC15Q9P013 229 aaKnown RBP18.61■□□□□ 0.57
ACTB-207ENST00000462494 STIM2Q9P246 746 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 TSKSQ9UJT2 592 aa18.61■□□□□ 0.57
ACTB-207ENST00000462494 FOSP01100 380 aaPredicted RBP18.6■□□□□ 0.57
ACTB-207ENST00000462494 BMP3P12645 472 aa18.6■□□□□ 0.57
ACTB-207ENST00000462494 HOXD13P35453 343 aa18.6■□□□□ 0.57
ACTB-207ENST00000462494 SPAG5Q96R06 1193 aa18.6■□□□□ 0.57
ACTB-207ENST00000462494 PLEKHA4Q9H4M7 779 aa18.6■□□□□ 0.57
ACTB-207ENST00000462494 AGPSO00116 658 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 CALUO43852 315 aaPredicted RBP18.59■□□□□ 0.57
ACTB-207ENST00000462494 GCNT3O95395 438 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 AFPP02771 609 aaKnown RBP18.59■□□□□ 0.57
ACTB-207ENST00000462494 RNASE9P60153 205 aaKnown RBP18.59■□□□□ 0.57
ACTB-207ENST00000462494 JAG1P78504 1218 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 FRMD5Q7Z6J6 570 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 GMCL1P1Q8NEA9 526 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 GMCL1Q96IK5 515 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 FAM20AQ96MK3 541 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 RGL1Q9NZL6 768 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 TRAF3IP3Q9Y228 551 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 NRXN2Q9P2S2 1712 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 SFI1A8K8P3 1242 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 TBCAO75347 108 aaKnown RBP18.59■□□□□ 0.57
ACTB-207ENST00000462494 XRCC5P13010 732 aaKnown RBP18.59■□□□□ 0.57
ACTB-207ENST00000462494 RBM26Q5T8P6 1007 aaKnown RBP18.59■□□□□ 0.57
ACTB-207ENST00000462494 MCTP2Q6DN12 878 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 SLC30A10Q6XR72 485 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.59■□□□□ 0.57
ACTB-207ENST00000462494 RUSC1Q9BVN2 902 aa18.59■□□□□ 0.57
ACTB-207ENST00000462494 CLIC2O15247 247 aa18.58■□□□□ 0.57
ACTB-207ENST00000462494 AKAP3O75969 853 aa18.58■□□□□ 0.57
ACTB-207ENST00000462494 PTK2Q05397 1052 aa18.58■□□□□ 0.57
ACTB-207ENST00000462494 EXOC3L4Q17RC7 722 aa18.58■□□□□ 0.57
ACTB-207ENST00000462494 EIF2AK1Q9BQI3 630 aaKnown RBP18.58■□□□□ 0.57
ACTB-207ENST00000462494 MRIQ9BWK5 157 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms