RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 RTN1Q16799 776 aa17.58■□□□□ 0.4
SKA3-204ENST00000462482 PTCRAQ6ISU1 281 aaPredicted RBP17.58■□□□□ 0.4
SKA3-204ENST00000462482 TSHZ1Q6ZSZ6 1077 aa17.58■□□□□ 0.4
SKA3-204ENST00000462482 FAM122AQ96E09 287 aa17.58■□□□□ 0.4
SKA3-204ENST00000462482 EPHX3Q9H6B9 360 aa17.58■□□□□ 0.4
SKA3-204ENST00000462482 KCNH7Q9NS40 1196 aa17.58■□□□□ 0.4
SKA3-204ENST00000462482 HCN4Q9Y3Q4 1203 aa17.58■□□□□ 0.4
SKA3-204ENST00000462482 TRIP12Q14669 1992 aaPredicted RBP17.57■□□□□ 0.4
SKA3-204ENST00000462482 ADGRA3Q8IWK6 1321 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 ENPP3O14638 875 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 INSRRP14616 1297 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 MGAT3Q09327 533 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 KRT32Q14532 448 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 TCEAL5Q5H9L2 206 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 FBXO47Q5MNV8 452 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 WWC2Q6AWC2 1192 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 APOA5Q6Q788 366 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 GJD3Q8N144 294 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 FTHL17Q9BXU8 183 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 LMAN2LQ9H0V9 348 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 RIC8AQ9NPQ8 531 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 RAPGEFL1Q9UHV5 662 aa17.57■□□□□ 0.4
SKA3-204ENST00000462482 NAP1L2Q9ULW6 460 aaPredicted RBP17.57■□□□□ 0.4
SKA3-204ENST00000462482 NFASCO94856 1347 aa17.56■□□□□ 0.4
SKA3-204ENST00000462482 GOLGA8AA7E2F4 631 aa17.56■□□□□ 0.4
SKA3-204ENST00000462482 GOLGA8BA8MQT2 603 aa17.56■□□□□ 0.4
SKA3-204ENST00000462482 BMPR1AP36894 532 aa17.56■□□□□ 0.4
SKA3-204ENST00000462482 STAT5BP51692 787 aa17.56■□□□□ 0.4
SKA3-204ENST00000462482 ACTR2P61160 394 aa17.56■□□□□ 0.4
SKA3-204ENST00000462482 CEP55Q53EZ4 464 aa17.56■□□□□ 0.4
SKA3-204ENST00000462482 DHX32Q7L7V1 743 aaKnown RBP17.56■□□□□ 0.4
SKA3-204ENST00000462482 PLPPR4Q7Z2D5 763 aa17.56■□□□□ 0.4
SKA3-204ENST00000462482 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.56■□□□□ 0.4
SKA3-204ENST00000462482 PABPC5Q96DU9 382 aaKnown RBP17.56■□□□□ 0.4
SKA3-204ENST00000462482 ANO3Q9BYT9 981 aa17.56■□□□□ 0.4
SKA3-204ENST00000462482 SQORQ9Y6N5 450 aa17.56■□□□□ 0.4
SKA3-204ENST00000462482 V9GY48 417 aaPredicted RBP17.56■□□□□ 0.4
SKA3-204ENST00000462482 SMCO2A6NFE2 343 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 H3BQ06 376 aaPredicted RBP17.55■□□□□ 0.4
SKA3-204ENST00000462482 RBAK-RBAKDNI3L0D1 243 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 BACH1O14867 736 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 HMGB1P09429 215 aaKnown RBP17.55■□□□□ 0.4
SKA3-204ENST00000462482 STAG3L1P0CL83 205 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 SLC26A2P50443 739 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 AP3B2Q13367 1082 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 BMP2KLQ5H9B9 411 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 MARCH8Q5T0T0 291 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 FAM160B1Q5W0V3 765 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 FAM178BQ8IXR5 827 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 PPP2R3CQ969Q6 453 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 LRFN3Q9BTN0 628 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 CLDND1Q9NY35 253 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 TRPV2Q9Y5S1 764 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 BDP1A6H8Y1 2624 aa17.55■□□□□ 0.4
SKA3-204ENST00000462482 CNTNAP5Q8WYK1 1306 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 TRANK1O15050 2925 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 POTEB3A0JP26 581 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 GRXCR2A6NFK2 248 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 C5orf67F2Z3F1 127 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 CD52P31358 61 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 PAK2Q13177 524 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 POTEBQ6S5H4 581 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 NME8Q8N427 588 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 NEK9Q8TD19 979 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 PGBD1Q96JS3 809 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 PLVAPQ9BX97 442 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 RNF216Q9NWF9 866 aaPredicted RBP17.54■□□□□ 0.4
SKA3-204ENST00000462482 TCEAL9Q9UHQ7 104 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 LRFN2Q9ULH4 789 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 PCDHA2Q9Y5H9 948 aa17.54■□□□□ 0.4
SKA3-204ENST00000462482 COL4A4P53420 1690 aaPredicted RBP17.54■□□□□ 0.4
SKA3-204ENST00000462482 MYH7BA7E2Y1 1941 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 COL4A6Q14031 1691 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 KLF18A0A0U1RQI7 1052 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 CCDC196A0A1B0GTZ2 297 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 GPR37L1O60883 481 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 ARP10275 920 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 ALADP13716 330 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 IL9P15248 144 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 PLA2G5P39877 138 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 COL9A3Q14050 684 aaPredicted RBP17.53■□□□□ 0.4
SKA3-204ENST00000462482 PLCB4Q15147 1175 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 ODR4Q5SWX8 454 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 MCTP2Q6DN12 878 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 FAM43BQ6ZT52 329 aaPredicted RBP17.53■□□□□ 0.4
SKA3-204ENST00000462482 NPAS4Q8IUM7 802 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 CYP2W1Q8TAV3 490 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 PCYT2Q99447 389 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 CELF4Q9BZC1 486 aaKnown RBP17.53■□□□□ 0.4
SKA3-204ENST00000462482 AGO4Q9HCK5 861 aaKnown RBP17.53■□□□□ 0.4
SKA3-204ENST00000462482 BARHL2Q9NY43 387 aa17.53■□□□□ 0.4
SKA3-204ENST00000462482 BAZ2BQ9UIF8 2168 aaKnown RBP17.53■□□□□ 0.4
SKA3-204ENST00000462482 SMIM35A0A1B0GVV1 85 aa17.52■□□□□ 0.4
SKA3-204ENST00000462482 PI4K2BG5E9Z4 385 aa17.52■□□□□ 0.4
SKA3-204ENST00000462482 STXBP3O00186 592 aa17.52■□□□□ 0.4
SKA3-204ENST00000462482 DGKIO75912 1065 aa17.52■□□□□ 0.4
SKA3-204ENST00000462482 SREBF1P36956 1147 aa17.52■□□□□ 0.4
SKA3-204ENST00000462482 RCAN1P53805 252 aa17.52■□□□□ 0.4
SKA3-204ENST00000462482 KRT76Q01546 638 aa17.52■□□□□ 0.4
SKA3-204ENST00000462482 EXOSC10Q01780 885 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms