RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 RRN3P2A6NIE6 340 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 EDIL3O43854 480 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 CAND2O75155 1236 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 CXCL10P02778 98 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 INSRRP14616 1297 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 ATP2A2P16615 1042 aaKnown RBP21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 PBX2P40425 430 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 IGBP1P78318 339 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 PLCB4Q15147 1175 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 RAB30Q15771 203 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 FAM160B1Q5W0V3 765 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 CNKSR3Q6P9H4 555 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 KRT25Q7Z3Z0 450 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 LENG9Q96B70 501 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 TTYH1Q9H313 450 aaPredicted RBP21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 SZT2Q5T011 3432 aa21.41■■□□□ 1.02
SLC6A1-204ENST00000462473 IGKV6D-21A0A0A0MT36 114 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 CCDC194A0A1B0GVG4 234 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 BAIAP3O94812 1187 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 CTSHP09668 335 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 FDPSP14324 419 aaKnown RBP21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 SLC26A2P50443 739 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 KRT76Q01546 638 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 ZNF746Q6NUN9 644 aaPredicted RBP21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 SWSAP1Q6NVH7 229 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 TAF2Q6P1X5 1199 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 NSUN7Q8NE18 718 aaKnown RBP21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 ZNF302Q9NR11 478 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 GJB4Q9NTQ9 266 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 TUBE1Q9UJT0 475 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 LIMCH1Q9UPQ0 1083 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 TANC1Q9C0D5 1861 aa21.4■■□□□ 1.02
SLC6A1-204ENST00000462473 POTEB3A0JP26 581 aa21.39■■□□□ 1.01
SLC6A1-204ENST00000462473 MSH4O15457 936 aa21.39■■□□□ 1.01
SLC6A1-204ENST00000462473 KCNJ6P48051 423 aa21.39■■□□□ 1.01
SLC6A1-204ENST00000462473 MBTPS1Q14703 1052 aa21.39■■□□□ 1.01
SLC6A1-204ENST00000462473 INF2Q27J81 1249 aa21.39■■□□□ 1.01
SLC6A1-204ENST00000462473 Q4G0T1 1027 aa21.39■■□□□ 1.01
SLC6A1-204ENST00000462473 POTEBQ6S5H4 581 aa21.39■■□□□ 1.01
SLC6A1-204ENST00000462473 CCDC60Q8IWA6 550 aaPredicted RBP21.39■■□□□ 1.01
SLC6A1-204ENST00000462473 SMAP1Q8IYB5 467 aaPredicted RBP21.39■■□□□ 1.01
SLC6A1-204ENST00000462473 GUCD1Q96NT3 240 aa21.39■■□□□ 1.01
SLC6A1-204ENST00000462473 ZNF576Q9H609 170 aa21.39■■□□□ 1.01
SLC6A1-204ENST00000462473 MBLAC1A4D2B0 266 aaPredicted RBP21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 TDP2O95551 362 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 PSAPP07602 524 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 RABGGTBP53611 331 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 MARCH8Q5T0T0 291 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 PDXDC2PQ6P474 469 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 RUFY4Q6ZNE9 571 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 RSPH3Q86UC2 560 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 PHOSPHO2Q8TCD6 241 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 SLC9A7Q96T83 725 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 KIF2CQ99661 725 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 BRMS1Q9HCU9 246 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 SAMM50Q9Y512 469 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 PCDHA10Q9Y5I2 948 aa21.38■■□□□ 1.01
SLC6A1-204ENST00000462473 CYP3A7-CYP3A51PA0A087WV96 503 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 JAK2O60674 1132 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 GAS7O60861 476 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 CYP3A7P24462 503 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 RBM25P49756 843 aaKnown RBP21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 IKBKEQ14164 716 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 LETM2Q2VYF4 491 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 MOXD1Q6UVY6 613 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 PIK3AP1Q6ZUJ8 805 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 OXER1Q8TDS5 423 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 SLC5A5Q92911 643 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 RIT2Q99578 217 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 CDX2Q99626 313 aaPredicted RBP21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 TEKT3Q9BXF9 490 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 NKX2-4Q9H2Z4 354 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 UPF2Q9HAU5 1272 aaKnown RBP21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 STXBP5LQ9Y2K9 1186 aa21.37■■□□□ 1.01
SLC6A1-204ENST00000462473 ABHD14A-ACY1A0A1B0GW23 586 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 HBP1O60381 514 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 KRT2P35908 639 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 LRCH2Q5VUJ6 765 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 RPAINQ86UA6 219 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 CCDC83Q8IWF9 413 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 CKAP2LQ8IYA6 745 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 DBF4BQ8NFT6 615 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 ATP8B4Q8TF62 1192 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 TRAPPC12Q8WVT3 735 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 DNAJB3Q8WWF6 145 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 GJA10Q969M2 543 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 ZSCAN31Q96LW9 406 aaPredicted RBP21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 SLC28A3Q9HAS3 691 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 DDX25Q9UHL0 483 aaKnown RBP21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 YBX2Q9Y2T7 364 aaKnown RBP21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 PCDHA11Q9Y5I1 949 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 KAT6AQ92794 2004 aa21.36■■□□□ 1.01
SLC6A1-204ENST00000462473 TET1Q8NFU7 2136 aa21.35■■□□□ 1.01
SLC6A1-204ENST00000462473 WDR64B1ANS9 1081 aa21.35■■□□□ 1.01
SLC6A1-204ENST00000462473 KIF28PB7ZC32 967 aa21.35■■□□□ 1.01
SLC6A1-204ENST00000462473 CHMP2AO43633 222 aa21.35■■□□□ 1.01
SLC6A1-204ENST00000462473 EFCAB14O75071 495 aa21.35■■□□□ 1.01
SLC6A1-204ENST00000462473 FOSBP53539 338 aa21.35■■□□□ 1.01
SLC6A1-204ENST00000462473 WDR5P61964 334 aaKnown RBP21.35■■□□□ 1.01
SLC6A1-204ENST00000462473 ST3GAL1Q11201 340 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms