RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 KRT76Q01546 638 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 NR5A1Q13285 461 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 INF2Q27J81 1249 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 KRT40Q6A162 431 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 ZNF365Q70YC5 407 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 NEK8Q86SG6 692 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 CCDC155Q8N6L0 562 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 RETREG2Q8NC44 543 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 LMBR1Q8WVP7 490 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 ATP6V0A1Q93050 837 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 SCLYQ96I15 445 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 KCNMB3Q9NPA1 279 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 SETD4Q9NVD3 440 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 NOD1Q9Y239 953 aa11.52□□□□□ -0.57
SPTAN1-204ENST00000461855 CCDC194A0A1B0GVG4 234 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 RRN3P2A6NIE6 340 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 BTBD18B2RXH4 712 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 TBX3O15119 743 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 SLC34A2O95436 690 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 FGBP02675 491 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 ACRP10323 421 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 KRT2P35908 639 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 CHMP4BP1P59074 171 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 SMAD3P84022 425 aaKnown RBP11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 PLCB4Q15147 1175 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 FAM26DQ5JW98 314 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 FAM109BQ6ICB4 259 aaPredicted RBP11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 LRRC8DQ7L1W4 858 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 CCDC60Q8IWA6 550 aaPredicted RBP11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 DIS3L2Q8IYB7 885 aaKnown RBP11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 FBXO18Q8NFZ0 1043 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 GLG1Q92896 1179 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 TNPO1Q92973 898 aaKnown RBP11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 LRCH3Q96II8 777 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 TMX3Q96JJ7 454 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 FAM20AQ96MK3 541 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 NAP1L4Q99733 375 aaKnown RBP11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 AZI2Q9H6S1 392 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 PCDHA10Q9Y5I2 948 aa11.51□□□□□ -0.57
SPTAN1-204ENST00000461855 SLC37A4O43826 429 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 NBNO60934 754 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 INSRRP14616 1297 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 PPFIA1Q13136 1202 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 MKRN4PQ13434 485 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 MBTPS1Q14703 1052 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 GRIK4Q16099 956 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 ZNF618Q5T7W0 954 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 SWSAP1Q6NVH7 229 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 MIS18BP1Q6P0N0 1132 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 TAF2Q6P1X5 1199 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 PIK3AP1Q6ZUJ8 805 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 RDM1Q8NG50 284 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 ATP8B4Q8TF62 1192 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 HAS1Q92839 578 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 RNPC3Q96LT9 517 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 BRMS1Q9HCU9 246 aa11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 CXXC1Q9P0U4 656 aaPredicted RBP11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 DDX25Q9UHL0 483 aaKnown RBP11.5□□□□□ -0.57
SPTAN1-204ENST00000461855 TRIP12Q14669 1992 aaPredicted RBP11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 FAM205CA6NFA0 338 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 WDR64B1ANS9 1081 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 ZBTB42B2RXF5 422 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 DDX39AO00148 427 aaKnown RBP11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 HBP1O60381 514 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 PSAPP07602 524 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 MARK3P27448 753 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 SFNP31947 248 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 PPP2R5CQ13362 524 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 LETM2Q2VYF4 491 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 LRCH2Q5VUJ6 765 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 FAM160B1Q5W0V3 765 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 C8orf76Q96K31 380 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 TEKT3Q9BXF9 490 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 FOXP1Q9H334 677 aaPredicted RBP11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 UNC45AQ9H3U1 944 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 ZNF302Q9NR11 478 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 DISC1Q9NRI5 854 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 VAV3Q9UKW4 847 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 PCDHA2Q9Y5H9 948 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 IGSF9BQ9UPX0 1349 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 TANC1Q9C0D5 1861 aa11.49□□□□□ -0.57
SPTAN1-204ENST00000461855 POTEB3A0JP26 581 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 WNT7AO00755 349 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 ZNF862O60290 1169 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 GAS7O60861 476 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 STBD1O95210 358 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 RPLP2P05387 115 aaKnown RBP11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 JAK3P52333 1124 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 SPIRE1Q08AE8 756 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 MGAT3Q09327 533 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 CUL4AQ13619 759 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 TRIM29Q14134 588 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 ZNF484Q5JVG2 852 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 PDXDC2PQ6P474 469 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 POTEBQ6S5H4 581 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 RUFY4Q6ZNE9 571 aa11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 BBXQ8WY36 941 aaPredicted RBP11.48□□□□□ -0.57
SPTAN1-204ENST00000461855 GJA10Q969M2 543 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms