RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 PRKAG2Q9UGJ0 569 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 GNEQ9Y223 722 aaKnown RBP17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 ATP11BQ9Y2G3 1177 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 Q9Y3F1 56 aa17.04■□□□□ 0.32
TMEM39A-203ENST00000461654 IPO5O00410 1097 aaKnown RBP17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 EIF3JO75822 258 aaKnown RBP17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 STAT6P42226 847 aa17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 TNFAIP2Q03169 654 aa17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 RRAGBQ5VZM2 374 aa17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 HAUS3Q68CZ6 603 aa17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 TAPT1Q6NXT6 567 aa17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 TDHQ8IZJ6 230 aa17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 SNX29Q8TEQ0 813 aa17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 ZFP91Q96JP5 570 aaPredicted RBP17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 TOX2Q96NM4 488 aa17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 LBHD1Q9BQE6 289 aaPredicted RBP17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 VTA1Q9NP79 307 aa17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 KCNH7Q9NS40 1196 aa17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 TBC1D22BQ9NU19 505 aa17.03■□□□□ 0.32
TMEM39A-203ENST00000461654 KDM3AQ9Y4C1 1321 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 POTEMA6NI47 508 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 PP2D1A8MPX8 630 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 C6orf222P0C671 652 aaPredicted RBP17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 SLFN14P0C7P3 912 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 ARP10275 920 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 CDC25AP30304 524 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 ZNF445P59923 1031 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 TLE2Q04725 743 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 LONRF3Q496Y0 759 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 GNASQ5JWF2 1037 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 NCAPH2Q6IBW4 605 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 GPR153Q6NV75 609 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 ANKRD33Q7Z3H0 272 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 ELOA2Q8IYF1 753 aaPredicted RBP17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 UIMC1Q96RL1 719 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 CUEDC2Q9H467 287 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 AGO4Q9HCK5 861 aaKnown RBP17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 STARD7Q9NQZ5 370 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 DISC1Q9NRI5 854 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 SERTAD1Q9UHV2 236 aa17.02■□□□□ 0.32
TMEM39A-203ENST00000461654 TRIOBPQ9H2D6 2365 aa17.02■□□□□ 0.31
TMEM39A-203ENST00000461654 MYADML2A6NDP7 307 aa17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 ASGR1P07306 291 aa17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 CCT6AP40227 531 aaKnown RBP17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 CDK7P50613 346 aa17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 MDM2Q00987 491 aaPredicted RBP17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 KARSQ15046 597 aaKnown RBP17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 SASS6Q6UVJ0 657 aa17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 GJA10Q969M2 543 aa17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 GLT1D1Q96MS3 346 aa17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 INPP4AQ96PE3 977 aaPredicted RBP17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 NT5C3AQ9H0P0 336 aa17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 MAGEF1Q9HAY2 307 aa17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 PDLIM7Q9NR12 457 aa17.01■□□□□ 0.31
TMEM39A-203ENST00000461654 RANBP2P49792 3224 aaKnown RBP17■□□□□ 0.31
TMEM39A-203ENST00000461654 C11orf97A0A1B0GVM6 126 aaPredicted RBP17■□□□□ 0.31
TMEM39A-203ENST00000461654 RBM47A0AV96 593 aaKnown RBP17■□□□□ 0.31
TMEM39A-203ENST00000461654 KIAA0355O15063 1070 aa17■□□□□ 0.31
TMEM39A-203ENST00000461654 PSMD10O75832 226 aa17■□□□□ 0.31
TMEM39A-203ENST00000461654 SMPD1P17405 629 aa17■□□□□ 0.31
TMEM39A-203ENST00000461654 EDNRBP24530 442 aa17■□□□□ 0.31
TMEM39A-203ENST00000461654 PPP2R5CQ13362 524 aa17■□□□□ 0.31
TMEM39A-203ENST00000461654 CKAP2LQ8IYA6 745 aa17■□□□□ 0.31
TMEM39A-203ENST00000461654 PDGFCQ9NRA1 345 aa17■□□□□ 0.31
TMEM39A-203ENST00000461654 PKD2L1Q9P0L9 805 aa17■□□□□ 0.31
TMEM39A-203ENST00000461654 VAV3Q9UKW4 847 aa17■□□□□ 0.31
TMEM39A-203ENST00000461654 MCM3APO60318 1980 aa16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 TRIM43BA6NCK2 446 aa16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 SOX1O00570 391 aaPredicted RBP16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 ACTN4O43707 911 aaKnown RBP16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 CABYRO75952 493 aa16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 SMC2O95347 1197 aa16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 CLTBP09497 229 aa16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 CCDC192P0DO97 292 aa16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 IRX5P78411 483 aaPredicted RBP16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 GSE1Q14687 1217 aa16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 DUSP28Q4G0W2 176 aa16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 LRSAM1Q6UWE0 723 aa16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 RBM43Q6ZSC3 357 aaKnown RBP16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 TRIM43Q96BQ3 446 aaPredicted RBP16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 STK17AQ9UEE5 414 aa16.99■□□□□ 0.31
TMEM39A-203ENST00000461654 A0A087X0B3 334 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 SPATA31C2B4DYI2 1134 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 CHMP2AO43633 222 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 PLCG1P19174 1290 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 AMPD3Q01432 767 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 KRT76Q01546 638 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 SPIRE1Q08AE8 756 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 FAAP100Q0VG06 881 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 POSTNQ15063 836 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 E2F4Q16254 413 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 KCNV1Q6PIU1 500 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 EEPD1Q7L9B9 569 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 SH3RF1Q7Z6J0 888 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 TLK2Q86UE8 772 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 FBXO16Q8IX29 292 aaPredicted RBP16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 KCTD17Q8N5Z5 321 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 GIMAP8Q8ND71 665 aaPredicted RBP16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 NEK9Q8TD19 979 aa16.98■□□□□ 0.31
TMEM39A-203ENST00000461654 PLIN2Q99541 437 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms