RNA–Protein interactions for RNA: ENST00000461522.1

UBA3-204, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-204ENST00000461522 DBPQ10586 325 aaPredicted RBP6.54□□□□□ -1.36
UBA3-204ENST00000461522 FIGNQ5HY92 759 aa6.54□□□□□ -1.36
UBA3-204ENST00000461522 BTBD8Q5XKL5 378 aa6.54□□□□□ -1.36
UBA3-204ENST00000461522 JMYQ8N9B5 988 aa6.54□□□□□ -1.36
UBA3-204ENST00000461522 MKL1Q969V6 931 aa6.54□□□□□ -1.36
UBA3-204ENST00000461522 CATSPERZQ9NTU4 200 aa6.54□□□□□ -1.36
UBA3-204ENST00000461522 PCDHA9Q9Y5H5 950 aa6.54□□□□□ -1.36
UBA3-204ENST00000461522 ZNF561-AS1K7EIQ3 104 aa6.53□□□□□ -1.36
UBA3-204ENST00000461522 CRTAMO95727 393 aa6.53□□□□□ -1.36
UBA3-204ENST00000461522 ZXDCQ2QGD7 858 aaPredicted RBP6.53□□□□□ -1.36
UBA3-204ENST00000461522 ARHGEF18Q6ZSZ5 1173 aa6.53□□□□□ -1.36
UBA3-204ENST00000461522 OSTM1Q86WC4 334 aa6.53□□□□□ -1.36
UBA3-204ENST00000461522 PTRH1Q86Y79 214 aaKnown RBP6.53□□□□□ -1.36
UBA3-204ENST00000461522 AJUBAQ96IF1 538 aa6.53□□□□□ -1.36
UBA3-204ENST00000461522 C8orf49Q96NF6 230 aa6.53□□□□□ -1.36
UBA3-204ENST00000461522 GPR20Q99678 358 aa6.53□□□□□ -1.36
UBA3-204ENST00000461522 MYRFQ9Y2G1 1151 aa6.53□□□□□ -1.36
UBA3-204ENST00000461522 ZDHHC9Q9Y397 364 aa6.53□□□□□ -1.36
UBA3-204ENST00000461522 ATP23Q9Y6H3 246 aa6.53□□□□□ -1.36
UBA3-204ENST00000461522 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.52□□□□□ -1.37
UBA3-204ENST00000461522 CCDC66A2RUB6 948 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 SRGAP2CP0DJJ0 459 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 GJA4P35212 333 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 JAM2P57087 298 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 SOGA3Q5TF21 947 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 CPZQ66K79 652 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 GSTCDQ8NEC7 633 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 DNAJC7Q99615 494 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 TACO1Q9BSH4 297 aaKnown RBP6.52□□□□□ -1.37
UBA3-204ENST00000461522 KATNBL1Q9H079 304 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 SLC52A2Q9HAB3 445 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 SMURF1Q9HCE7 757 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 SLC39A2Q9NP94 309 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 RIC8BQ9NVN3 520 aa6.52□□□□□ -1.37
UBA3-204ENST00000461522 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.51□□□□□ -1.37
UBA3-204ENST00000461522 NPEPPSL1A6NEC2 478 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 H0Y858 1186 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 GSTA4O15217 222 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 GPR42O15529 346 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 B4GALT4O60513 344 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 EFCAB14O75071 495 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 INSRRP14616 1297 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 ZNF20P17024 532 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 CSF2RBP32927 897 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 ST5P78524 1137 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 LACTBP83111 547 aaPredicted RBP6.51□□□□□ -1.37
UBA3-204ENST00000461522 CRY1Q16526 586 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 TRIM61Q5EBN2 209 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 FAM47CQ5HY64 1035 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 SLFN13Q68D06 897 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 RALYLQ86SE5 291 aaKnown RBP6.51□□□□□ -1.37
UBA3-204ENST00000461522 ZC3H7AQ8IWR0 971 aaKnown RBP6.51□□□□□ -1.37
UBA3-204ENST00000461522 REXO1L1PQ8IX06 675 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 DNERQ8NFT8 737 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 SRPK1Q96SB4 655 aaKnown RBP6.51□□□□□ -1.37
UBA3-204ENST00000461522 MEGF9Q9H1U4 602 aa6.51□□□□□ -1.37
UBA3-204ENST00000461522 C1QTNF3-AMACRE9PGA6 284 aa6.5□□□□□ -1.37
UBA3-204ENST00000461522 CLASP2O75122 1294 aaKnown RBP6.5□□□□□ -1.37
UBA3-204ENST00000461522 CNOT4O95628 575 aaKnown RBP6.5□□□□□ -1.37
UBA3-204ENST00000461522 C4BPAP04003 597 aaKnown RBP6.5□□□□□ -1.37
UBA3-204ENST00000461522 KRT15P19012 456 aa6.5□□□□□ -1.37
UBA3-204ENST00000461522 SF3A1Q15459 793 aaKnown RBP6.5□□□□□ -1.37
UBA3-204ENST00000461522 CIR1Q86X95 450 aaPredicted RBP6.5□□□□□ -1.37
UBA3-204ENST00000461522 SLC7A14Q8TBB6 771 aa6.5□□□□□ -1.37
UBA3-204ENST00000461522 PTPN18Q99952 460 aa6.5□□□□□ -1.37
UBA3-204ENST00000461522 CD248Q9HCU0 757 aa6.5□□□□□ -1.37
UBA3-204ENST00000461522 NDOR1Q9UHB4 597 aa6.5□□□□□ -1.37
UBA3-204ENST00000461522 ST6GALNAC2Q9UJ37 374 aa6.5□□□□□ -1.37
UBA3-204ENST00000461522 SLC4A7Q9Y6M7 1214 aa6.5□□□□□ -1.37
UBA3-204ENST00000461522 AOAHP28039 575 aa6.49□□□□□ -1.37
UBA3-204ENST00000461522 DNM2P50570 870 aa6.49□□□□□ -1.37
UBA3-204ENST00000461522 ICAM4Q14773 271 aa6.49□□□□□ -1.37
UBA3-204ENST00000461522 ZSWIM2Q8NEG5 633 aa6.49□□□□□ -1.37
UBA3-204ENST00000461522 CHST13Q8NET6 341 aa6.49□□□□□ -1.37
UBA3-204ENST00000461522 THAP3Q8WTV1 239 aaPredicted RBP6.49□□□□□ -1.37
UBA3-204ENST00000461522 DVL3Q92997 716 aaPredicted RBP6.49□□□□□ -1.37
UBA3-204ENST00000461522 BTBD7Q9P203 1132 aa6.49□□□□□ -1.37
UBA3-204ENST00000461522 ARHGAP28Q9P2N2 729 aa6.49□□□□□ -1.37
UBA3-204ENST00000461522 CCDC163A0A0D9SF12 145 aa6.48□□□□□ -1.37
UBA3-204ENST00000461522 KCNQ2O43526 872 aa6.48□□□□□ -1.37
UBA3-204ENST00000461522 RASGRP1O95267 797 aa6.48□□□□□ -1.37
UBA3-204ENST00000461522 POLD1P28340 1107 aa6.48□□□□□ -1.37
UBA3-204ENST00000461522 HERVK_113P62684 666 aa6.48□□□□□ -1.37
UBA3-204ENST00000461522 PUM1Q14671 1186 aaKnown RBP eCLIP6.48□□□□□ -1.37
UBA3-204ENST00000461522 DPP8Q6V1X1 898 aaPredicted RBP6.48□□□□□ -1.37
UBA3-204ENST00000461522 EP400NLQ6ZTU2 488 aa6.48□□□□□ -1.37
UBA3-204ENST00000461522 GPR155Q7Z3F1 870 aa6.48□□□□□ -1.37
UBA3-204ENST00000461522 SCLYQ96I15 445 aa6.48□□□□□ -1.37
UBA3-204ENST00000461522 CELF4Q9BZC1 486 aaKnown RBP6.48□□□□□ -1.37
UBA3-204ENST00000461522 SEC61A2Q9H9S3 476 aa6.48□□□□□ -1.37
UBA3-204ENST00000461522 JADE2Q9NQC1 790 aa6.48□□□□□ -1.37
UBA3-204ENST00000461522 PATE3B3GLJ2 98 aa6.47□□□□□ -1.37
UBA3-204ENST00000461522 KCNK3O14649 394 aa6.47□□□□□ -1.37
UBA3-204ENST00000461522 CUTAO60888 179 aa6.47□□□□□ -1.37
UBA3-204ENST00000461522 PTGS1P23219 599 aa6.47□□□□□ -1.37
UBA3-204ENST00000461522 TOP3AQ13472 1001 aaPredicted RBP6.47□□□□□ -1.37
UBA3-204ENST00000461522 USP10Q14694 798 aaKnown RBP6.47□□□□□ -1.37
UBA3-204ENST00000461522 SEC23AQ15436 765 aa6.47□□□□□ -1.37
UBA3-204ENST00000461522 C2orf27AQ580R0 203 aa6.47□□□□□ -1.37
UBA3-204ENST00000461522 NOSTRINQ8IVI9 506 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms