RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 DNAJC7Q99615 494 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 CNNM2Q9H8M5 875 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 CEMIPQ8WUJ3 1361 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 PALLDQ8WX93 1383 aa6.05□□□□□ -1.44
ATPAF1-203ENST00000460928 ERVV-2B6SEH9 535 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 RFXAPO00287 272 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 ELL2O00472 640 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 TCERG1O14776 1098 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 SIGLEC6O43699 453 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 HOXA5P20719 270 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 CASP7P55210 303 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 CTSWP56202 376 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 TEFQ10587 303 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 IFRD2Q12894 506 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 FXNQ16595 210 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 ADGRF1Q5T601 910 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 LARP1BQ659C4 914 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 TMEM151BQ8IW70 566 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 LILRB2Q8N423 598 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 RTF1Q92541 710 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 TSR2Q969E8 191 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 HHIPL1Q96JK4 782 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 PARD6AQ9NPB6 346 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 MBD1Q9UIS9 605 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 ZMYM5Q9UJ78 669 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 CCNL1Q9UK58 526 aaPredicted RBP6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 KCTD3Q9Y597 815 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 KCPQ6ZWJ8 1503 aa6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 MYH14Q7Z406 1995 aaKnown RBP6.04□□□□□ -1.44
ATPAF1-203ENST00000460928 ADAMTS20P59510 1910 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 MRC1P22897 1456 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 LY75O60449 1722 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 PDPK1O15530 556 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 PRAMEF1O95521 474 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 ANXA1P04083 346 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 HSP90AB1P08238 724 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 PNLIPP16233 465 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 ENDOUP21128 410 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 GALK1P51570 392 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 YBX1P67809 324 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 SNW1Q13573 536 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 TAF7Q15545 349 aaPredicted RBP6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 SLC14A2Q15849 920 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 LRRFIP1Q32MZ4 808 aaKnown RBP6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 TCERG1LQ5VWI1 586 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 RUFY4Q6ZNE9 571 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 CEP128Q6ZU80 1094 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 NLRC3Q7RTR2 1065 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 SH3TC2Q8TF17 1288 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 ATG4CQ96DT6 458 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 FCRL2Q96LA5 508 aaPredicted RBP6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 SGPP1Q9BX95 441 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 RGPD3A6NKT7 1758 aaPredicted RBP6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 RGPD4Q7Z3J3 1758 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 PAPPAQ13219 1627 aa6.03□□□□□ -1.44
ATPAF1-203ENST00000460928 TJP1Q07157 1748 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 TUBGCP6Q96RT7 1819 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 C5P01031 1676 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 SSU72P8A0A1W2PR75 194 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 MEIS3P2A8K0S8 358 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 CLEC3AO75596 197 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 A1BGP04217 495 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 SYPP08247 313 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 POLR2BP30876 1174 aaKnown RBP6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 ERVFRD-1P60508 538 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 RASGRF1Q13972 1273 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 ZNF790Q6PG37 636 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 MICAL1Q8TDZ2 1067 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 SIGLEC10Q96LC7 697 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 C20orf173Q96LM9 149 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 KCNC2Q96PR1 638 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 KRTAP9-3Q9BYQ3 159 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 ANTXR1Q9H6X2 564 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 KANSL2Q9H9L4 492 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 PRR13Q9NZ81 148 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 TNFRSF10DQ9UBN6 386 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 TSPYL4Q9UJ04 414 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 USP16Q9Y5T5 823 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 TAF1LQ8IZX4 1826 aa6.02□□□□□ -1.45
ATPAF1-203ENST00000460928 KDM3BQ7LBC6 1761 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 A0A1W2PQH9 124 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 FADS2P1A8MWK0 482 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 CHL1O00533 1208 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 ABLIM1O14639 778 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 TNFRSF10CO14798 259 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 PLSCR1O15162 318 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 HTATSF1O43719 755 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 DDAH1O94760 285 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 GJB6O95452 261 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 BUD31P41223 144 aaPredicted RBP6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 EIF4A1P60842 406 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 SRSF3P84103 164 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 RBM10P98175 930 aaKnown RBP6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 SSPNQ14714 243 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 PTPROQ16827 1216 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 PROSER3Q2NL68 480 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 PLEKHG4Q58EX7 1191 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 RNF187Q5TA31 235 aaPredicted RBP6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 OLFML2BQ68BL8 750 aa6.01□□□□□ -1.45
ATPAF1-203ENST00000460928 SIRT2Q8IXJ6 389 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms