RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 TTC12Q9H892 705 aaPredicted RBP15.78■□□□□ 0.12
HDLBP-229ENST00000460826 ZNF302Q9NR11 478 aa15.78■□□□□ 0.12
HDLBP-229ENST00000460826 TRMT13Q9NUP7 481 aaKnown RBP15.78■□□□□ 0.12
HDLBP-229ENST00000460826 ZNF215Q9UL58 517 aaPredicted RBP15.78■□□□□ 0.12
HDLBP-229ENST00000460826 SAMM50Q9Y512 469 aa15.78■□□□□ 0.12
HDLBP-229ENST00000460826 EVPLQ92817 2033 aa15.78■□□□□ 0.12
HDLBP-229ENST00000460826 IGSF9BQ9UPX0 1349 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 TCHHQ07283 1943 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 PSAPP07602 524 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 SMIM10L2AP0DMW4 78 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 SMIM10L2BP0DMW5 78 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 SFNP31947 248 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 ZNF200P98182 395 aaPredicted RBP15.77■□□□□ 0.12
HDLBP-229ENST00000460826 PLCB4Q15147 1175 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 GDF6Q6KF10 455 aaPredicted RBP15.77■□□□□ 0.12
HDLBP-229ENST00000460826 PLPPR4Q7Z2D5 763 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 AFAP1L1Q8TED9 768 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 CTAGE1Q96RT6 745 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 TSHZ2Q9NRE2 1034 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 ERAP1Q9NZ08 941 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 GABBR1Q9UBS5 961 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 PCDHA12Q9UN75 941 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 ZDHHC9Q9Y397 364 aa15.77■□□□□ 0.12
HDLBP-229ENST00000460826 LTBP2Q14767 1821 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 POTEMA6NI47 508 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 ZNF862O60290 1169 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 EVI5O60447 810 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 B4GALT4O60513 344 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 F13A1P00488 732 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 CD4P01730 458 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 ATP2C1P98194 919 aaPredicted RBP15.76■□□□□ 0.11
HDLBP-229ENST00000460826 PTPN11Q06124 597 aaPredicted RBP15.76■□□□□ 0.11
HDLBP-229ENST00000460826 FAAP100Q0VG06 881 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 IL17AQ16552 155 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 FAM160B1Q5W0V3 765 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 PDXDC2PQ6P474 469 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 SH3RF1Q7Z6J0 888 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 SESTD1Q86VW0 696 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 C7orf31Q8N865 590 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 RDM1Q8NG50 284 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 TOX2Q96NM4 488 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 SEZ6LQ9BYH1 1024 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 ZSCAN16Q9H4T2 348 aaPredicted RBP15.76■□□□□ 0.11
HDLBP-229ENST00000460826 PDLIM7Q9NR12 457 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 GTF2IRD1Q9UHL9 959 aa15.76■□□□□ 0.11
HDLBP-229ENST00000460826 MAFBQ9Y5Q3 323 aaPredicted RBP15.76■□□□□ 0.11
HDLBP-229ENST00000460826 MROH7Q68CQ1 1323 aa15.75■□□□□ 0.11
HDLBP-229ENST00000460826 DCDC2CA8MYV0 355 aa15.75■□□□□ 0.11
HDLBP-229ENST00000460826 BRD1O95696 1058 aa15.75■□□□□ 0.11
HDLBP-229ENST00000460826 HOXC8P31273 242 aa15.75■□□□□ 0.11
HDLBP-229ENST00000460826 TECP42680 631 aa15.75■□□□□ 0.11
HDLBP-229ENST00000460826 EPHA7Q15375 998 aa15.75■□□□□ 0.11
HDLBP-229ENST00000460826 SF3A1Q15459 793 aaKnown RBP15.75■□□□□ 0.11
HDLBP-229ENST00000460826 BANK1Q8NDB2 785 aa15.75■□□□□ 0.11
HDLBP-229ENST00000460826 SETD4Q9NVD3 440 aa15.75■□□□□ 0.11
HDLBP-229ENST00000460826 ZMYND8Q9ULU4 1186 aaPredicted RBP15.75■□□□□ 0.11
HDLBP-229ENST00000460826 CLIC4Q9Y696 253 aa15.75■□□□□ 0.11
HDLBP-229ENST00000460826 ARID2Q68CP9 1835 aa15.75■□□□□ 0.11
HDLBP-229ENST00000460826 TRIM43BA6NCK2 446 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 CLTBP09497 229 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 CYP2C9P11712 490 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 PDIA4P13667 645 aaKnown RBP15.74■□□□□ 0.11
HDLBP-229ENST00000460826 DDIT3P35638 169 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 ANP32AP39687 249 aaKnown RBP15.74■□□□□ 0.11
HDLBP-229ENST00000460826 PTPAQ15257 358 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 FOXD4L6Q3SYB3 417 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-229ENST00000460826 FOXD4L3Q6VB84 417 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-229ENST00000460826 TRMT1LQ7Z2T5 733 aaKnown RBP15.74■□□□□ 0.11
HDLBP-229ENST00000460826 ATP8B4Q8TF62 1192 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 LMBR1Q8WVP7 490 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 TRAPPC12Q8WVT3 735 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 TRIM43Q96BQ3 446 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-229ENST00000460826 ZBTB10Q96DT7 871 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 DYDC2Q96IM9 177 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 USP28Q96RU2 1077 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 RGL1Q9NZL6 768 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 WRAP73Q9P2S5 460 aaPredicted RBP15.74■□□□□ 0.11
HDLBP-229ENST00000460826 TBX21Q9UL17 535 aa15.74■□□□□ 0.11
HDLBP-229ENST00000460826 SCN5AQ14524 2016 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 POTEB3A0JP26 581 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 C17orf102A2RUQ5 167 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 LAD1O00515 517 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 TLR3O15455 904 aaKnown RBP15.73■□□□□ 0.11
HDLBP-229ENST00000460826 STBD1O95210 358 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 INSRRP14616 1297 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 SYN1P17600 705 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 PRPHP41219 470 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 SLC26A2P50443 739 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.112e-7■□□□□ 9.7
HDLBP-229ENST00000460826 ADAM17P78536 824 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 PRKCEQ02156 737 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 CYP4A11Q02928 519 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 CEBPZQ03701 1054 aaKnown RBP15.73■□□□□ 0.11
HDLBP-229ENST00000460826 PPFIA1Q13136 1202 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 CTTNQ14247 550 aaKnown RBP15.73■□□□□ 0.11
HDLBP-229ENST00000460826 GRIK4Q16099 956 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 PTGISQ16647 500 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 POTEBQ6S5H4 581 aa15.73■□□□□ 0.11
HDLBP-229ENST00000460826 DHX38Q92620 1227 aaKnown RBP15.73■□□□□ 0.11
HDLBP-229ENST00000460826 WNT8BQ93098 351 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms