RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 KLHDC9Q8NEP7 349 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 RASSF8Q8NHQ8 419 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 NEK9Q8TD19 979 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 SYMPKQ92797 1274 aaKnown RBP11.42□□□□□ -0.58
UPF2-204ENST00000460569 GLG1Q92896 1179 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 DYDC2Q96IM9 177 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 LXNQ9BS40 222 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 AZI2Q9H6S1 392 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 ZNF302Q9NR11 478 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 RGL1Q9NZL6 768 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 STK24Q9Y6E0 443 aa11.42□□□□□ -0.58
UPF2-204ENST00000460569 KDM3AQ9Y4C1 1321 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 IGKV6D-21A0A0A0MT36 114 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 POTEB3A0JP26 581 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 GOLGA6L4A6NEF3 574 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 KPNA6O60684 536 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 MED24O75448 989 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 LGR5O75473 907 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 SGPL1O95470 568 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 TFRCP02786 760 aaKnown RBP11.41□□□□□ -0.58
UPF2-204ENST00000460569 P4HBP07237 508 aaKnown RBP11.41□□□□□ -0.58
UPF2-204ENST00000460569 ASGR1P07306 291 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 MARK3P27448 753 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 STAT5BP51692 787 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 CHMP4BP1P59074 171 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 PSMC5P62195 406 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 NKX3-2P78367 333 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 CTTNQ14247 550 aaKnown RBP11.41□□□□□ -0.58
UPF2-204ENST00000460569 KCNA10Q16322 511 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 PDXDC2PQ6P474 469 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 POTEBQ6S5H4 581 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 CXCL17Q6UXB2 119 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 CABP7Q86V35 215 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 ZNF579Q8NAF0 562 aaKnown RBP11.41□□□□□ -0.58
UPF2-204ENST00000460569 TMEM87AQ8NBN3 555 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 ATP6V0A1Q93050 837 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 EPSTI1Q96J88 318 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 CDK5RAP3Q96JB5 506 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 PCYT2Q99447 389 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 MMTAG2Q9BU76 263 aaKnown RBP11.41□□□□□ -0.58
UPF2-204ENST00000460569 SMARCAD1Q9H4L7 1026 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 ZNF215Q9UL58 517 aaPredicted RBP11.41□□□□□ -0.58
UPF2-204ENST00000460569 OGDHLQ9ULD0 1010 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 SCN10AQ9Y5Y9 1956 aa11.41□□□□□ -0.58
UPF2-204ENST00000460569 GOLGA6L22H0YM25 854 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 DNM1LO00429 736 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 DKC1O60832 514 aaKnown RBP eCLIP11.4□□□□□ -0.58
UPF2-204ENST00000460569 F2P00734 622 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 RPA1P27694 616 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 QARSP47897 775 aaKnown RBP11.4□□□□□ -0.58
UPF2-204ENST00000460569 GJA8P48165 433 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 PURAQ00577 322 aaKnown RBP11.4□□□□□ -0.58
UPF2-204ENST00000460569 PRKCEQ02156 737 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 KARSQ15046 597 aaKnown RBP11.4□□□□□ -0.58
UPF2-204ENST00000460569 RESP18Q5W5W9 173 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 ADALQ6DHV7 355 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 POTEGQ6S5H5 508 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 SHC4Q6S5L8 630 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 USP49Q70CQ1 688 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 TRMT1LQ7Z2T5 733 aaKnown RBP11.4□□□□□ -0.58
UPF2-204ENST00000460569 TPH2Q8IWU9 490 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 CKAP2LQ8IYA6 745 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 FSIP1Q8NA03 581 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 AFAP1L1Q8TED9 768 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 CALML4Q96GE6 196 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 C16orf70Q9BSU1 422 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 TSEN34Q9BSV6 310 aaKnown RBP11.4□□□□□ -0.58
UPF2-204ENST00000460569 MTG1Q9BT17 334 aaPredicted RBP11.4□□□□□ -0.58
UPF2-204ENST00000460569 POLR3CQ9BUI4 534 aaPredicted RBP11.4□□□□□ -0.58
UPF2-204ENST00000460569 KATNAL1Q9BW62 490 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 CCSER1Q9C0I3 900 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 CRISPLD2Q9H0B8 497 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 TUFT1Q9NNX1 390 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 FAM13BQ9NYF5 915 aa11.4□□□□□ -0.58
UPF2-204ENST00000460569 KIAA0100Q14667 2235 aaKnown RBP11.4□□□□□ -0.58
UPF2-204ENST00000460569 A0A1W2PQ27 194 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 A0A1W2PQ64 194 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 A0A1W2PQD8 194 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 MOXD2PA6NHM9 499 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 H3BRB1 525 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 ZNF862O60290 1169 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 SLITRK3O94933 977 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 OATP04181 439 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 SPATA31C1P0DKV0 1188 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 CENPFP49454 3210 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 PSEN2P49810 448 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 ACLYP53396 1101 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 MFSD10Q14728 455 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 CCSAPQ6IQ19 270 aaPredicted RBP11.39□□□□□ -0.59
UPF2-204ENST00000460569 PLPPR4Q7Z2D5 763 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 CATSPER3Q86XQ3 398 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 MRPS27Q92552 414 aaKnown RBP11.39□□□□□ -0.59
UPF2-204ENST00000460569 KAT6AQ92794 2004 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 FAM167AQ96KS9 214 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 PLIN2Q99541 437 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 HSD17B14Q9BPX1 270 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 NT5C3AQ9H0P0 336 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 TUT1Q9H6E5 874 aaKnown RBP11.39□□□□□ -0.59
UPF2-204ENST00000460569 ZSWIM4Q9H7M6 989 aa11.39□□□□□ -0.59
UPF2-204ENST00000460569 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms