RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 MYH6P13533 1939 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 VWA3AA6NCI4 1184 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 DDX39AO00148 427 aaKnown RBP12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 DNM1LO00429 736 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 ATP9AO75110 1047 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 SGPL1O95470 568 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 ARHGAP1Q07960 439 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 ITGB3BPQ13352 177 aaPredicted RBP12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 NCAPH2Q6IBW4 605 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 FAM173BQ6P4H8 233 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 PLPPR4Q7Z2D5 763 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 HAS1Q92839 578 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 UNC93B1Q9H1C4 597 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 ZSWIM4Q9H7M6 989 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 NRBP2Q9NSY0 501 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 PPME1Q9Y570 386 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 RBBP6Q7Z6E9 1792 aaKnown RBP12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 CASP8AP2Q9UKL3 1982 aa12.37□□□□□ -0.43
SMNDC1-203ENST00000460483 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 DHX15O43143 795 aaKnown RBP12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 CHMP2AO43633 222 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 ATG7O95352 703 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 ARIH2O95376 493 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 RPLP2P05387 115 aaKnown RBP12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 SUPT20HL2P0C7V6 817 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 GNAT1P11488 350 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 XRCC6P12956 609 aaKnown RBP eCLIP12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 TCF7P36402 384 aaPredicted RBP12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 QARSP47897 775 aaKnown RBP12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 GJA8P48165 433 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 STAT5BP51692 787 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 PSMC5P62195 406 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 SP2Q02086 613 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 SP4Q02446 784 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 TRIM32Q13049 653 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 SEMA3FQ13275 785 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 NBR1Q14596 966 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 PTPAQ15257 358 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 ADALQ6DHV7 355 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 CKAP2LQ8IYA6 745 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 C4orf32Q8N8J7 132 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 IGSF22Q8N9C0 903 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 TRPV1Q8NER1 839 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 U2AF1L4Q8WU68 220 aaKnown RBP12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 AFG1LQ8WV93 481 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 LEO1Q8WVC0 666 aaPredicted RBP12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 GPR20Q99678 358 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 MTG1Q9BT17 334 aaPredicted RBP12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 LRRC27Q9C0I9 530 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 TMEM60Q9H2L4 133 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 TUFT1Q9NNX1 390 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 ZNF302Q9NR11 478 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 OGDHLQ9ULD0 1010 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 EMSYQ7Z589 1322 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 SYNRGQ9UMZ2 1314 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 PCNTO95613 3336 aa12.36□□□□□ -0.43
SMNDC1-203ENST00000460483 EDIL3O43854 480 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 MMP3P08254 477 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 HOXD8P13378 290 aaPredicted RBP12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 RPA1P27694 616 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 MARCKSP29966 332 aaPredicted RBP12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 HSDL1Q3SXM5 330 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 PDXDC2PQ6P474 469 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 ABHD15Q6UXT9 468 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 CCDC73Q6ZRK6 1079 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 CLEC17AQ6ZS10 378 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 AFAP1L1Q8TED9 768 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 SNX29Q8TEQ0 813 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 VTI1AQ96AJ9 217 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 NACC1Q96RE7 527 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 JPH2Q9BR39 696 aaPredicted RBP12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 POLR3CQ9BUI4 534 aaPredicted RBP12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 UNC45AQ9H3U1 944 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 VAV3Q9UKW4 847 aa12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 DDX49Q9Y6V7 483 aaKnown RBP12.35□□□□□ -0.43
SMNDC1-203ENST00000460483 H3BRB1 525 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 RIOK3O14730 519 aaKnown RBP12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 ADAMTS4O75173 837 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 PGK1P00558 417 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 MYCP01106 439 aaPredicted RBP12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 MYL3P08590 195 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 CCT6AP40227 531 aaKnown RBP12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 LRRC41Q15345 812 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 MTFR1Q15390 333 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 XKR3Q5GH77 459 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 SWSAP1Q6NVH7 229 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 B3GNT9Q6UX72 402 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 C4orf19Q8IY42 314 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 KLHDC9Q8NEP7 349 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 BBXQ8WY36 941 aaPredicted RBP12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 CCSER1Q9C0I3 900 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 CRISPLD2Q9H0B8 497 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 CUEDC2Q9H467 287 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 TUT1Q9H6E5 874 aaKnown RBP12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 USP25Q9UHP3 1055 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 HOOK1Q9UJC3 728 aaKnown RBP12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 FBXO2Q9UK22 296 aaPredicted RBP12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 DNM3Q9UQ16 869 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 MROH7Q68CQ1 1323 aa12.34□□□□□ -0.43
SMNDC1-203ENST00000460483 IGKV6D-21A0A0A0MT36 114 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms