RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 ARMCX3Q9UH62 379 aaPredicted RBP16.91■□□□□ 0.3
LMNB1-203ENST00000460265 PPP1R12BO60237 982 aaPredicted RBP16.9■□□□□ 0.3
LMNB1-203ENST00000460265 DACT2Q5SW24 774 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 NOA1Q8NC60 698 aaKnown RBP16.9■□□□□ 0.3
LMNB1-203ENST00000460265 JDP2Q8WYK2 163 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 RABGAP1Q9Y3P9 1069 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 ROBO3Q96MS0 1386 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 SNED1Q8TER0 1413 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 A0A1W2PQC6 194 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 KIAA0754O94854 1291 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 KSR1Q8IVT5 923 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 NAP1L4Q99733 375 aaKnown RBP16.9■□□□□ 0.3
LMNB1-203ENST00000460265 SLC24A3Q9HC58 644 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 PRR12Q9ULL5 1215 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 GCOM1H8Y6P7 765 aaPredicted RBP16.9■□□□□ 0.3
LMNB1-203ENST00000460265 EPHB6O15197 1021 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 ECM2O94769 699 aaPredicted RBP16.9■□□□□ 0.3
LMNB1-203ENST00000460265 POLR2MP0CAP2 368 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 DCAF4Q8WV16 495 aa16.9■□□□□ 0.3
LMNB1-203ENST00000460265 RSPH10B2B2RC85 870 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 RSPH10BP0C881 870 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 LRRC63Q05C16 580 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 CATSPER3Q86XQ3 398 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 BCAS4Q8TDM0 211 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 LRP5O75197 1615 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 BIRC2Q13490 618 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 DNAAF5Q86Y56 855 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 FGFBP2Q9BYJ0 223 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 GOPCQ9HD26 462 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 NYAP2Q9P242 653 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 PCDHA13Q9Y5I0 950 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 PPP1R12AO14974 1030 aaPredicted RBP16.89■□□□□ 0.29
LMNB1-203ENST00000460265 PPP4R3AQ6IN85 833 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 TTLL6Q8N841 843 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 RETREG2Q8NC44 543 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 TAF4BQ92750 862 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 CABS1Q96KC9 395 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 PDGFDQ9GZP0 370 aaPredicted RBP16.89■□□□□ 0.29
LMNB1-203ENST00000460265 SMARCAL1Q9NZC9 954 aa16.89■□□□□ 0.29
LMNB1-203ENST00000460265 LRRIQ3A6PVS8 624 aaPredicted RBP16.88■□□□□ 0.29
LMNB1-203ENST00000460265 ZBTB39O15060 712 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 NCK2O43639 380 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 XRCC5P13010 732 aaKnown RBP16.88■□□□□ 0.29
LMNB1-203ENST00000460265 C2orf54Q08AI8 447 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 PRPF4BQ13523 1007 aaKnown RBP16.88■□□□□ 0.29
LMNB1-203ENST00000460265 NEDD9Q14511 834 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 CENPPQ6IPU0 288 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 NIM1KQ8IY84 436 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 GSPT2Q8IYD1 628 aaKnown RBP16.88■□□□□ 0.29
LMNB1-203ENST00000460265 N4BP2L2Q92802 583 aaPredicted RBP16.88■□□□□ 0.29
LMNB1-203ENST00000460265 RUFY1Q96T51 708 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 ACTN1P12814 892 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 WHAMMP3Q1A5X7 153 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 KIAA0753Q2KHM9 967 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 SH3BP5LQ7L8J4 393 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 CEP120Q8N960 986 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 RNF217Q8TC41 542 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 CHURC1Q8WUH1 139 aa16.88■□□□□ 0.29
LMNB1-203ENST00000460265 RIN2Q8WYP3 895 aaPredicted RBP16.88■□□□□ 0.29
LMNB1-203ENST00000460265 CCDC189A1A4V9 331 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 FOSP01100 380 aaPredicted RBP16.87■□□□□ 0.29
LMNB1-203ENST00000460265 KCNV1Q6PIU1 500 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 WDR59Q6PJI9 974 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 HS2ST1Q7LGA3 356 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 IFT81Q8WYA0 676 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 MMS19Q96T76 1030 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 CCPG1Q9ULG6 757 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 A0A1W2PRG0 241 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 FAM86B1E9PN63 330 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 PSMD14O00487 310 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 FAM86B2P0C5J1 330 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 SLC7A5Q01650 507 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 TNIP1Q15025 636 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 ARHGAP44Q17R89 818 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 OTUD6BQ8N6M0 293 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 FAM76AQ8TAV0 307 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 ZNF577Q9BSK1 485 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 ATF5Q9Y2D1 282 aaPredicted RBP16.87■□□□□ 0.29
LMNB1-203ENST00000460265 ARHGEF35A5YM69 484 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 FTCDO95954 541 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 EPB41P11171 864 aaKnown RBP16.87■□□□□ 0.29
LMNB1-203ENST00000460265 USP11P51784 963 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 HERVK_113P62684 666 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 SARNPP82979 210 aaKnown RBP16.87■□□□□ 0.29
LMNB1-203ENST00000460265 CKAP4Q07065 602 aaKnown RBP16.87■□□□□ 0.29
LMNB1-203ENST00000460265 KCNH2Q12809 1159 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 ASIC2Q16515 512 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 SUPT20HQ8NEM7 779 aa16.87■□□□□ 0.29
LMNB1-203ENST00000460265 PSMD2Q13200 908 aa16.86■□□□□ 0.29
LMNB1-203ENST00000460265 IQCEQ6IPM2 695 aa16.86■□□□□ 0.29
LMNB1-203ENST00000460265 CDAN1Q8IWY9 1227 aa16.86■□□□□ 0.29
LMNB1-203ENST00000460265 ZNF507Q8TCN5 953 aa16.86■□□□□ 0.29
LMNB1-203ENST00000460265 DYDC2Q96IM9 177 aa16.86■□□□□ 0.29
LMNB1-203ENST00000460265 REEP2Q9BRK0 252 aa16.86■□□□□ 0.29
LMNB1-203ENST00000460265 ZNF341Q9BYN7 854 aa16.86■□□□□ 0.29
LMNB1-203ENST00000460265 RAB21Q9UL25 225 aa16.86■□□□□ 0.29
LMNB1-203ENST00000460265 RCCD1A6NED2 376 aa16.86■□□□□ 0.29
LMNB1-203ENST00000460265 CYP11B2P19099 503 aa16.86■□□□□ 0.29
LMNB1-203ENST00000460265 RPL13P26373 211 aaKnown RBP16.86■□□□□ 0.29
LMNB1-203ENST00000460265 ELF1P32519 619 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms