RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 BACH2Q9BYV9 841 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TUT1Q9H6E5 874 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 AZI2Q9H6S1 392 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 RTN4Q9NQC3 1192 aaKnown RBP11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TBC1D22BQ9NU19 505 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 EMSYQ7Z589 1322 aa11.75□□□□□ -0.53
HLA-DQB1-207ENST00000460185 FAM86B1E9PN63 330 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 IPO5O00410 1097 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TIMP1P01033 207 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 CD4P01730 458 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 FAM86B2P0C5J1 330 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 CIITAP33076 1130 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TCF7P36402 384 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PTPN5P54829 565 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 FPGSQ05932 587 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 BFSP2Q13515 415 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PRR16Q569H4 304 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 MOXD1Q6UVY6 613 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TMEM199Q8N511 208 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 CRYGNQ8WXF5 182 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SEPT1Q8WYJ6 367 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PPP1R12CQ9BZL4 782 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 HIPK3Q9H422 1215 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 AGO4Q9HCK5 861 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 GTF2IRD1Q9UHL9 959 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 KCNJ14Q9UNX9 436 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 GRIN2DO15399 1336 aa11.74□□□□□ -0.53
HLA-DQB1-207ENST00000460185 IGLV3-22A0A075B6J6 115 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TRIM43BA6NCK2 446 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 JAK2O60674 1132 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ATP9AO75110 1047 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 MMP1P03956 469 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 GNAT1P11488 350 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 GCFC2P16383 781 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 KRT76Q01546 638 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PPIGQ13427 754 aaKnown RBP eCLIP11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 GNL2Q13823 731 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SCN5AQ14524 2016 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PTGISQ16647 500 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 UTP14CQ5TAP6 766 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 MFSD5Q6N075 450 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SH3RF1Q7Z6J0 888 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 NEK8Q86SG6 692 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SMAP1Q8IYB5 467 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TDHQ8IZJ6 230 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 CAGE1Q8TC20 777 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 KAT2BQ92831 832 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 GLG1Q92896 1179 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 BADQ92934 168 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TRIM43Q96BQ3 446 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 C8orf76Q96K31 380 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 C16orf70Q9BSU1 422 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TRPV6Q9H1D0 765 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SMARCAD1Q9H4L7 1026 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TRMT13Q9NUP7 481 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ERAP1Q9NZ08 941 aa11.73□□□□□ -0.53
HLA-DQB1-207ENST00000460185 C17orf102A2RUQ5 167 aa11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 HAS3O00219 553 aa11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ARP10275 920 aa11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 FDPSP14324 419 aaKnown RBP11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SLC26A2P50443 739 aa11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ACTR2P61160 394 aa11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 FAM160B1Q5W0V3 765 aa11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 KRT40Q6A162 431 aa11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 MIS18BP1Q6P0N0 1132 aa11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PSRC1Q6PGN9 363 aaPredicted RBP11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PIK3AP1Q6ZUJ8 805 aa11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 RETREG2Q8NC44 543 aa11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 CYP2W1Q8TAV3 490 aa11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 MTIF3Q9H2K0 278 aaKnown RBP11.72□□□□□ -0.53
HLA-DQB1-207ENST00000460185 RANBP2P49792 3224 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PPP1R3GB7ZBB8 358 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 M0R2N6 131 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 DDX39AO00148 427 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 BACH1O14867 736 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 GAS7O60861 476 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PARNO95453 639 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 RPLP2P05387 115 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ST3GAL1Q11201 340 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ITGB3BPQ13352 177 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 NPY5RQ15761 445 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 INF2Q27J81 1249 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 LETM2Q2VYF4 491 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 Q4G0T1 1027 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 HABP4Q5JVS0 413 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 LRCH2Q5VUJ6 765 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ZNF746Q6NUN9 644 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TRIM50Q86XT4 487 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 DIS3L2Q8IYB7 885 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 AFAP1L1Q8TED9 768 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 RIT2Q99578 217 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 NOC4LQ9BVI4 516 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 TEKT3Q9BXF9 490 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 PRO3102Q9H379 93 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 HDAC6Q9UBN7 1215 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 DDX25Q9UHL0 483 aaKnown RBP11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 SAMM50Q9Y512 469 aa11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.71□□□□□ -0.53
HLA-DQB1-207ENST00000460185 ARID2Q68CP9 1835 aa11.71□□□□□ -0.54
HLA-DQB1-207ENST00000460185 LOXHD1Q8IVV2 1947 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms