RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 SOX10P56693 466 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 CNTN2Q02246 1040 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 ORC2Q13416 577 aaPredicted RBP10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 TMEM132AQ24JP5 1023 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 RAD9BQ6WBX8 426 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 OTOP1Q7RTM1 612 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 LENG9Q96B70 501 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 BICD1Q96G01 975 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 PRIMPOLQ96LW4 560 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 NACC1Q96RE7 527 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 PSMB7Q99436 277 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 THAP9Q9H5L6 903 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 SLC38A10Q9HBR0 1119 aa10.33□□□□□ -0.76
NUDCD3-203ENST00000460110 IRF6O14896 467 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 STX10O60499 249 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 SLITRK3O94933 977 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 SPATA31C1P0DKV0 1188 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 POLR2FP61218 127 aaKnown RBP10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 MAP3K9P80192 1104 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 SPA17Q15506 151 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 TEX35Q5T0J7 233 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 PADI6Q6TGC4 694 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 GUF1Q8N442 669 aaKnown RBP10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 KLRG1Q96E93 195 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 LSM14BQ9BX40 385 aaKnown RBP10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 PUF60Q9UHX1 559 aaKnown RBP10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 ZNF215Q9UL58 517 aaPredicted RBP10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 EXOC3O60645 756 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 TKFCQ3LXA3 575 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 DNAJC19Q96DA6 116 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 ARMCX3Q9UH62 379 aaPredicted RBP10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 LIMA1Q9UHB6 759 aaKnown RBP10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 GOLGA8IPA6NC78 632 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 GOLGA8JA6NMD2 632 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 PGK2P07205 417 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 MARK3P27448 753 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 IREB2P48200 963 aaKnown RBP10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 PEX3P56589 373 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 TMEM119Q4V9L6 283 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 ARSHQ5FYA8 562 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 TREML2Q5T2D2 321 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 SWSAP1Q6NVH7 229 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 KIFC3Q9BVG8 833 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 TEX13BQ9BXU2 312 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 PARVGQ9HBI0 331 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 HOXC10Q9NYD6 342 aa10.32□□□□□ -0.76
NUDCD3-203ENST00000460110 ETF1P62495 437 aaKnown RBP10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 GIT2Q14161 759 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 VWA3BQ502W6 1294 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 CCDC122Q5T0U0 273 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 RINT1Q6NUQ1 792 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 CYP26C1Q6V0L0 522 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 MYRIPQ8NFW9 859 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 SCFD1Q8WVM8 642 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 CCDC127Q96BQ5 260 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 CEP170P1Q96L14 293 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 MAP7D2Q96T17 732 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 ADARB2Q9NS39 739 aaKnown RBP10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 USP20Q9Y2K6 914 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 YBX3P16989 372 aaKnown RBP eCLIP10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 TMEM132BQ14DG7 1078 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 MTERF2Q49AM1 385 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 Q4G0T1 1027 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 HINFPQ9BQA5 517 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 CARD6Q9BX69 1037 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 ABHD10Q9NUJ1 306 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 GABBR1Q9UBS5 961 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 TRIM10Q9UDY6 481 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 PAXBP1Q9Y5B6 917 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 EPN1Q9Y6I3 576 aaPredicted RBP10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 POTEB2H3BUK9 544 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 ENC1O14682 589 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 MYCNP04198 464 aaPredicted RBP10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 CASP4P49662 377 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 MAN2A1Q16706 1144 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 CYFIP1Q7L576 1253 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 CAPZA3Q96KX2 299 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 PDCD2LQ9BRP1 358 aa10.31□□□□□ -0.76
NUDCD3-203ENST00000460110 ZNF536O15090 1300 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 IGLV3-22A0A075B6J6 115 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 TBX3O15119 743 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 HIP1RO75146 1068 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 EYA4O95677 639 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 EPB41P11171 864 aaKnown RBP10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 XRCC5P13010 732 aaKnown RBP10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 MRPS9P82933 396 aaKnown RBP10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 PAXIP1Q6ZW49 1069 aaPredicted RBP10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 TMTC1Q8IUR5 882 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 SYT2Q8N9I0 419 aaPredicted RBP10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 NSUN6Q8TEA1 469 aaKnown RBP10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 SLC10A4Q96EP9 437 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 ZBED3Q96IU2 234 aaPredicted RBP10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 WDR24Q96S15 920 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 ACAD9Q9H845 621 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 SUGCTQ9HAC7 445 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 MAST2Q6P0Q8 1798 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 SLC16A4O15374 487 aa10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 USP2O75604 605 aaPredicted RBP10.3□□□□□ -0.76
NUDCD3-203ENST00000460110 PLEKP08567 350 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms