RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 HMGB1P1B2RPK0 211 aaPredicted RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 CCDC188H7C350 402 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 TRAF5O00463 557 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 PDXKO00764 312 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 CETN3O15182 167 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 EPHB6O15197 1021 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 EIF3HO15372 352 aaKnown RBP eCLIP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 PPIP5K2O43314 1243 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 PHACTR2O75167 634 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 TTLL1O95922 423 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 PLEKP08567 350 aaPredicted RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 GOLGA8HP0CJ92 632 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 MYBL2P10244 700 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 FKBP1AP62942 108 aaKnown RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 TNNC1P63316 161 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 ZNF543Q08ER8 600 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 AP3B2Q13367 1082 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 CUL1Q13616 776 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 PPP2R5EQ16537 467 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 CCDC40Q4G0X9 1142 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 NFRKBQ6P4R8 1299 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 MICALCLQ6ZW33 695 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 YTHDF3Q7Z739 585 aaKnown RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 PNMA8AQ86V59 439 aaPredicted RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 SUGP1Q8IWZ8 645 aaKnown RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 C10orf67Q8IYJ2 551 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 ARFGAP2Q8N6H7 521 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 TBC1D16Q8TBP0 767 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 ACTRT1Q8TDG2 376 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 MKL1Q969V6 931 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 L3MBTL3Q96JM7 780 aaPredicted RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 CCDC17Q96LX7 622 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 INPP4AQ96PE3 977 aaPredicted RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 MRIQ9BWK5 157 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 GANQ9H2C0 597 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 KCTD10Q9H3F6 313 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 MLXIPQ9HAP2 919 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 METTL14Q9HCE5 456 aaKnown RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 FAM207AQ9NSI2 230 aaPredicted RBP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 RSPH14Q9UHP6 348 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 PCDHA12Q9UN75 941 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 PSME4Q14997 1843 aa6.73□□□□□ -1.33
UBQLN4-202ENST00000459954 USP17L5A8MUK1 530 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 ZBTB5O15062 677 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 SLC16A3O15427 465 aaKnown RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 SLC37A4O43826 429 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 CALUO43852 315 aaPredicted RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 TLR2O60603 784 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 UFL1O94874 794 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 TDP2O95551 362 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 FOSP01100 380 aaPredicted RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 MUTP22033 750 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 RPL13P26373 211 aaKnown RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 HSPA9P38646 679 aaKnown RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 SLC1A4P43007 532 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 NOP2P46087 812 aaKnown RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 RASSF7Q02833 373 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 KLHL30Q0D2K2 578 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 TRAF1Q13077 416 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 DRP2Q13474 957 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 BIRC3Q13489 604 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 DIXDC1Q155Q3 683 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 ASIC2Q16515 512 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 BMT2Q1RMZ1 405 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 TTC31Q49AM3 519 aaPredicted RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 TDRD12Q587J7 1177 aaKnown RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 CFAP58Q5T655 872 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 STRIP1Q5VSL9 837 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 EPM2AIP1Q7L775 607 aaPredicted RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 DYMQ7RTS9 669 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 SLFN11Q7Z7L1 901 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 TADA2BQ86TJ2 420 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 USP38Q8NB14 1042 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 SLC44A5Q8NCS7 719 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 AGBL3Q8NEM8 1001 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 SCFD2Q8WU76 684 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 DCAF4Q8WV16 495 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 TAF4BQ92750 862 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 HAS1Q92839 578 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 VTI1AQ96AJ9 217 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 LRRC45Q96CN5 670 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 FAM20AQ96MK3 541 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 ISCUQ9H1K1 167 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 EHD4Q9H223 541 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 SLITRK6Q9H5Y7 841 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 JMJD4Q9H9V9 463 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 KCNMB3Q9NPA1 279 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 EMILIN3Q9NT22 766 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 RBM12Q9NTZ6 932 aaKnown RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 TMEM260Q9NX78 707 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 POLLQ9UGP5 575 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 DDX25Q9UHL0 483 aaKnown RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 LCMT1Q9UIC8 334 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 SALL4Q9UJQ4 1053 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 TTC7AQ9ULT0 858 aaPredicted RBP6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 SYNPO2Q9UMS6 1093 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 NENFQ9UMX5 172 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 TFR2Q9UP52 801 aa6.72□□□□□ -1.33
UBQLN4-202ENST00000459954 GRIN2DO15399 1336 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms