RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 H2AFY2Q9P0M6 372 aaPredicted RBP8.82□□□□□ -1
CKAP2-204ENST00000459902 CNOT6Q9ULM6 557 aaKnown RBP8.82□□□□□ -1
CKAP2-204ENST00000459902 PI3P19957 117 aa8.81□□□□□ -1
CKAP2-204ENST00000459902 POU3F3P20264 500 aaPredicted RBP8.81□□□□□ -1
CKAP2-204ENST00000459902 KIF11P52732 1056 aa8.81□□□□□ -1
CKAP2-204ENST00000459902 DBPQ10586 325 aaPredicted RBP8.81□□□□□ -1
CKAP2-204ENST00000459902 STRN3Q13033 797 aa8.81□□□□□ -1
CKAP2-204ENST00000459902 SART3Q15020 963 aaKnown RBP8.81□□□□□ -1
CKAP2-204ENST00000459902 ZNF124Q15973 351 aa8.81□□□□□ -1
CKAP2-204ENST00000459902 CT47A1Q5JQC4 288 aaPredicted RBP8.81□□□□□ -1
CKAP2-204ENST00000459902 CC2D1AQ6P1N0 951 aaPredicted RBP8.81□□□□□ -1
CKAP2-204ENST00000459902 AFAP1L2Q8N4X5 818 aa8.81□□□□□ -1
CKAP2-204ENST00000459902 KIAA1958Q8N8K9 716 aa8.81□□□□□ -1
CKAP2-204ENST00000459902 GPR101Q96P66 508 aaPredicted RBP8.81□□□□□ -1
CKAP2-204ENST00000459902 KCTD3Q9Y597 815 aa8.81□□□□□ -1
CKAP2-204ENST00000459902 PLA2G1BP04054 148 aaKnown RBP8.8□□□□□ -1
CKAP2-204ENST00000459902 SLC9A1P19634 815 aa8.8□□□□□ -1
CKAP2-204ENST00000459902 TXKP42681 527 aa8.8□□□□□ -1
CKAP2-204ENST00000459902 RAP1GAPP47736 663 aa8.8□□□□□ -1
CKAP2-204ENST00000459902 ITGA1P56199 1179 aa8.8□□□□□ -1
CKAP2-204ENST00000459902 HERVK_113P62684 666 aa8.8□□□□□ -1
CKAP2-204ENST00000459902 ZNF174Q15697 407 aa8.8□□□□□ -1
CKAP2-204ENST00000459902 TMC5Q6UXY8 1006 aa8.8□□□□□ -1
CKAP2-204ENST00000459902 LINC00482Q8N8I6 264 aa8.8□□□□□ -1
CKAP2-204ENST00000459902 C11orf84Q9BUA3 381 aaPredicted RBP8.8□□□□□ -1
CKAP2-204ENST00000459902 PCDH18Q9HCL0 1135 aa8.8□□□□□ -1
CKAP2-204ENST00000459902 RASSF10A6NK89 507 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 MMEP08473 750 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 ENO2P09104 434 aaPredicted RBP8.79□□□□□ -1
CKAP2-204ENST00000459902 BPIP17213 487 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 SDHAP31040 664 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 THBS2P35442 1172 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 ADCYAP1R1P41586 468 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 HTRA3P83110 453 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 NFKB2Q00653 900 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 PFKPQ01813 784 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 KCNA10Q16322 511 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 CATSPEREQ5SY80 951 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 VASNQ6EMK4 673 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 CNKSR3Q6P9H4 555 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 ELF4Q99607 663 aaPredicted RBP8.79□□□□□ -1
CKAP2-204ENST00000459902 SLC39A2Q9NP94 309 aa8.79□□□□□ -1
CKAP2-204ENST00000459902 NPIPB6E9PJ23 425 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 FOXP2O15409 715 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 FKBP9O95302 570 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 EYA4O95677 639 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 C8AP07357 584 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 KPNA1P52294 538 aaPredicted RBP8.78□□□□□ -1
CKAP2-204ENST00000459902 LINC00310P59036 64 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 IL2P60568 153 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 ADAM9Q13443 819 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 SMAD4Q13485 552 aaKnown RBP8.78□□□□□ -1
CKAP2-204ENST00000459902 PKN1Q16512 942 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 FKBP9P1Q75LS8 142 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 FNIP1Q8TF40 1166 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 ASB15Q8WXK1 588 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 USP7Q93009 1102 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 ZBTB8AQ96BR9 441 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 PWWP2AQ96N64 755 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 PCIF1Q9H4Z3 704 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 ACSS2Q9NR19 701 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 SPTLC3Q9NUV7 552 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 BTBD7Q9P203 1132 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 SPO11Q9Y5K1 396 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 PMF1-BGLAPU3KQ54 211 aa8.78□□□□□ -1
CKAP2-204ENST00000459902 ZNF839A8K0R7 811 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 NEMP1O14524 444 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 PTX3P26022 381 aaPredicted RBP8.77□□□□□ -1.01
CKAP2-204ENST00000459902 AOAHP28039 575 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 ID4P47928 161 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 LSSP48449 732 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 AMPD3Q01432 767 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 ZNF385BQ569K4 471 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 EFHBQ8N7U6 833 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 DTX3Q8N9I9 347 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 KYQ8NBH2 561 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 GBP4Q96PP9 640 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 TMEM209Q96SK2 561 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 IFT22Q9H7X7 185 aa8.77□□□□□ -1.01
CKAP2-204ENST00000459902 TGM5O43548 720 aa8.76□□□□□ -1.01
CKAP2-204ENST00000459902 RTP5Q14D33 572 aa8.76□□□□□ -1.01
CKAP2-204ENST00000459902 IGDCC4Q8TDY8 1250 aa8.76□□□□□ -1.01
CKAP2-204ENST00000459902 GPATCH3Q96I76 525 aa8.76□□□□□ -1.01
CKAP2-204ENST00000459902 ZSWIM3Q96MP5 696 aa8.76□□□□□ -1.01
CKAP2-204ENST00000459902 TTC1Q99614 292 aa8.76□□□□□ -1.01
CKAP2-204ENST00000459902 DLL4Q9NR61 685 aa8.76□□□□□ -1.01
CKAP2-204ENST00000459902 ARHGAP28Q9P2N2 729 aa8.76□□□□□ -1.01
CKAP2-204ENST00000459902 ZEB2O60315 1214 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 CYP17A1P05093 508 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 MC4RP32245 332 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 OCRLQ01968 901 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 PTPROQ16827 1216 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 SKIDA1Q1XH10 827 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 PHF19Q5T6S3 580 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 TTLL6Q8N841 843 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 DACT3Q96B18 629 aaPredicted RBP8.75□□□□□ -1.01
CKAP2-204ENST00000459902 EMC7Q9NPA0 242 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 TOMM22Q9NS69 142 aa8.75□□□□□ -1.01
CKAP2-204ENST00000459902 SPATA6Q9NWH7 488 aaPredicted RBP8.75□□□□□ -1.01
CKAP2-204ENST00000459902 UCKL1Q9NWZ5 548 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms