RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 IRF2BPLQ9H1B7 796 aa18.8■□□□□ 0.6
SHF-202ENST00000458022 AGO3Q9H9G7 860 aaKnown RBP18.8■□□□□ 0.6
SHF-202ENST00000458022 TUBE1Q9UJT0 475 aa18.8■□□□□ 0.6
SHF-202ENST00000458022 CDY2AQ9Y6F7 541 aa18.8■□□□□ 0.6
SHF-202ENST00000458022 PNMA6FA0A0J9YX94 578 aa18.79■□□□□ 0.6
SHF-202ENST00000458022 CYTH3O43739 400 aa18.79■□□□□ 0.6
SHF-202ENST00000458022 ATF7P17544 494 aaPredicted RBP18.79■□□□□ 0.6
SHF-202ENST00000458022 TCF7P36402 384 aaPredicted RBP18.79■□□□□ 0.6
SHF-202ENST00000458022 VCPP55072 806 aaKnown RBP18.79■□□□□ 0.6
SHF-202ENST00000458022 GRM4Q14833 912 aa18.79■□□□□ 0.6
SHF-202ENST00000458022 GRIK4Q16099 956 aa18.79■□□□□ 0.6
SHF-202ENST00000458022 MARCH8Q5T0T0 291 aa18.79■□□□□ 0.6
SHF-202ENST00000458022 XRRA1Q6P2D8 792 aa18.79■□□□□ 0.6
SHF-202ENST00000458022 RBM23Q86U06 439 aaKnown RBP18.79■□□□□ 0.6
SHF-202ENST00000458022 RTN4RL1Q86UN2 441 aaPredicted RBP18.79■□□□□ 0.6
SHF-202ENST00000458022 GIMAP8Q8ND71 665 aaPredicted RBP18.79■□□□□ 0.6
SHF-202ENST00000458022 DNAJB3Q8WWF6 145 aa18.79■□□□□ 0.6
SHF-202ENST00000458022 FTHL17Q9BXU8 183 aa18.79■□□□□ 0.6
SHF-202ENST00000458022 FAM86C1Q9NVL1 165 aa18.79■□□□□ 0.6
SHF-202ENST00000458022 SQORQ9Y6N5 450 aa18.79■□□□□ 0.6
SHF-202ENST00000458022 ZDBF2Q9HCK1 2354 aa18.78■□□□□ 0.6
SHF-202ENST00000458022 RPLP2P05387 115 aaKnown RBP18.78■□□□□ 0.6
SHF-202ENST00000458022 AVPR2P30518 371 aa18.78■□□□□ 0.6
SHF-202ENST00000458022 CD52P31358 61 aa18.78■□□□□ 0.6
SHF-202ENST00000458022 MRPS6P82932 125 aaKnown RBP18.78■□□□□ 0.6
SHF-202ENST00000458022 FOXK2Q01167 660 aa18.78■□□□□ 0.6
SHF-202ENST00000458022 HDAC1Q13547 482 aaPredicted RBP18.78■□□□□ 0.6
SHF-202ENST00000458022 PCNX4Q63HM2 1172 aa18.78■□□□□ 0.6
SHF-202ENST00000458022 CWC27Q6UX04 472 aaKnown RBP18.78■□□□□ 0.6
SHF-202ENST00000458022 SUSD6Q92537 303 aa18.78■□□□□ 0.6
SHF-202ENST00000458022 RPGRIP1Q96KN7 1286 aa18.78■□□□□ 0.6
SHF-202ENST00000458022 ERAP1Q9NZ08 941 aa18.78■□□□□ 0.6
SHF-202ENST00000458022 LAMA4Q16363 1823 aa18.78■□□□□ 0.6
SHF-202ENST00000458022 STAG3L1P0CL83 205 aa18.77■□□□□ 0.6
SHF-202ENST00000458022 NLRX1Q86UT6 975 aa18.77■□□□□ 0.6
SHF-202ENST00000458022 ATP8B4Q8TF62 1192 aa18.77■□□□□ 0.6
SHF-202ENST00000458022 TLE6Q9H808 572 aa18.77■□□□□ 0.6
SHF-202ENST00000458022 PCDHGC5Q9Y5F6 944 aa18.77■□□□□ 0.6
SHF-202ENST00000458022 TTC3P53804 2025 aa18.77■□□□□ 0.6
SHF-202ENST00000458022 CACNA1HO95180 2353 aa18.77■□□□□ 0.6
SHF-202ENST00000458022 MYH6P13533 1939 aa18.76■□□□□ 0.59
SHF-202ENST00000458022 NUBP1P53384 320 aa18.76■□□□□ 0.59
SHF-202ENST00000458022 UBE3AQ05086 875 aa18.76■□□□□ 0.59
SHF-202ENST00000458022 PAN2Q504Q3 1202 aaKnown RBP18.76■□□□□ 0.59
SHF-202ENST00000458022 CYB5R4Q7L1T6 521 aa18.76■□□□□ 0.59
SHF-202ENST00000458022 ATOH1Q92858 354 aaPredicted RBP18.76■□□□□ 0.59
SHF-202ENST00000458022 DIAPH3Q9NSV4 1193 aa18.76■□□□□ 0.59
SHF-202ENST00000458022 GSTTP1A0A1W2PQM5 241 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 FSD2A1L4K1 749 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 SCG2P13521 617 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 KCNA2P16389 499 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 MARK3P27448 753 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 PTPN21Q16825 1174 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 IER5Q5VY09 327 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
SHF-202ENST00000458022 VN1R2Q8NFZ6 395 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 SEPT1Q8WYJ6 367 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 GPRASP2Q96D09 838 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 CDCA3Q99618 268 aaPredicted RBP18.75■□□□□ 0.59
SHF-202ENST00000458022 LNPKQ9C0E8 428 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 PADI3Q9ULW8 664 aa18.75■□□□□ 0.59
SHF-202ENST00000458022 ZFHX2Q9C0A1 2572 aaPredicted RBP18.75■□□□□ 0.59
SHF-202ENST00000458022 KMT2EQ8IZD2 1858 aa18.74■□□□□ 0.59
SHF-202ENST00000458022 RRN3P2A6NIE6 340 aa18.74■□□□□ 0.59
SHF-202ENST00000458022 PIK3CDO00329 1044 aa18.74■□□□□ 0.59
SHF-202ENST00000458022 ATP9AO75110 1047 aa18.74■□□□□ 0.59
SHF-202ENST00000458022 GATMP50440 423 aa18.74■□□□□ 0.59
SHF-202ENST00000458022 TROAPQ12815 778 aa18.74■□□□□ 0.59
SHF-202ENST00000458022 CDHR1Q96JP9 859 aa18.74■□□□□ 0.59
SHF-202ENST00000458022 FAM49AQ9H0Q0 323 aaPredicted RBP18.74■□□□□ 0.59
SHF-202ENST00000458022 SMARCAD1Q9H4L7 1026 aa18.74■□□□□ 0.59
SHF-202ENST00000458022 IGSF9BQ9UPX0 1349 aa18.74■□□□□ 0.59
SHF-202ENST00000458022 PROB1E7EW31 1015 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 HIP1O00291 1037 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 PER2O15055 1255 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 RBM10P98175 930 aaKnown RBP18.73■□□□□ 0.59
SHF-202ENST00000458022 DUSP6Q16828 381 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 USP17L6PQ6QN14 398 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 SMARCC2Q8TAQ2 1214 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 MICAL1Q8TDZ2 1067 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 GLG1Q92896 1179 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 ZBTB10Q96DT7 871 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 NEK1Q96PY6 1258 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 OSBPL3Q9H4L5 887 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 TLR9Q9NR96 1032 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 TRPV2Q9Y5S1 764 aa18.73■□□□□ 0.59
SHF-202ENST00000458022 MEIS2O14770 477 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 PPFIA3O75145 1194 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 INSRRP14616 1297 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 IGBP1P78318 339 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 PAK2Q13177 524 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 TMEM184AQ6ZMB5 413 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 FAM43BQ6ZT52 329 aaPredicted RBP18.72■□□□□ 0.59
SHF-202ENST00000458022 CUL5Q93034 780 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 RIPOR3Q96MK2 946 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 S1PR5Q9H228 398 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 TMX1Q9H3N1 280 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 PCDHB12Q9Y5F1 795 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 CFAP54Q96N23 3096 aa18.72■□□□□ 0.59
SHF-202ENST00000458022 H0Y858 1186 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 436.3 ms