RNA–Protein interactions for RNA: ENST00000457109.5

PKP4-207, Transcript of plakophilin 4, humanhuman

TSL 3

Gene PKP4, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-207ENST00000457109 SPRED2Q7Z698 418 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 SP7Q8TDD2 431 aaPredicted RBP10.06□□□□□ -0.8
PKP4-207ENST00000457109 C11orf84Q9BUA3 381 aaPredicted RBP10.06□□□□□ -0.8
PKP4-207ENST00000457109 FAM49AQ9H0Q0 323 aaPredicted RBP10.06□□□□□ -0.8
PKP4-207ENST00000457109 CDY2AQ9Y6F7 541 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 EYSQ5T1H1 3165 aa10.06□□□□□ -0.8
PKP4-207ENST00000457109 LCTP09848 1927 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.05□□□□□ -0.8
PKP4-207ENST00000457109 KLF18A0A0U1RQI7 1052 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.05□□□□□ -0.8
PKP4-207ENST00000457109 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 CDC45O75419 566 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 BMPR1AP36894 532 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 ACTR2P61160 394 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 MRPS6P82932 125 aaKnown RBP10.05□□□□□ -0.8
PKP4-207ENST00000457109 AP3B2Q13367 1082 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 LEXMQ3ZCV2 418 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 TMEM31Q5JXX7 168 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 WWC2Q6AWC2 1192 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 PTCRAQ6ISU1 281 aaPredicted RBP10.05□□□□□ -0.8
PKP4-207ENST00000457109 APOA5Q6Q788 366 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 RUFY4Q6ZNE9 571 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 PLPPR4Q7Z2D5 763 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 CKAP2LQ8IYA6 745 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 FAM122AQ96E09 287 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 LMAN2LQ9H0V9 348 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 NSUN3Q9H649 340 aaKnown RBP10.05□□□□□ -0.8
PKP4-207ENST00000457109 C6orf50Q9HD87 102 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 HCN4Q9Y3Q4 1203 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 PCDHA2Q9Y5H9 948 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 TRPV2Q9Y5S1 764 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 SQORQ9Y6N5 450 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 NFASCO94856 1347 aa10.05□□□□□ -0.8
PKP4-207ENST00000457109 MBLAC1A4D2B0 266 aaPredicted RBP10.04□□□□□ -0.8
PKP4-207ENST00000457109 HBP1O60381 514 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 ALADP13716 330 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 IBSPP21815 317 aaPredicted RBP10.04□□□□□ -0.8
PKP4-207ENST00000457109 GNA11P29992 359 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 METAP2P50579 478 aaKnown RBP eCLIP10.04□□□□□ -0.89e-10■■□□□ 11.4
PKP4-207ENST00000457109 KRT76Q01546 638 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 EXOSC10Q01780 885 aaKnown RBP10.04□□□□□ -0.8
PKP4-207ENST00000457109 NFX1Q12986 1120 aaKnown RBP10.04□□□□□ -0.8
PKP4-207ENST00000457109 PAK2Q13177 524 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 LPIN1Q14693 890 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 CSPP1Q1MSJ5 1256 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 FBXO47Q5MNV8 452 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 SPOUT1Q5T280 376 aaKnown RBP10.04□□□□□ -0.8
PKP4-207ENST00000457109 MIS18BP1Q6P0N0 1132 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 PLA2G4DQ86XP0 818 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 GJD3Q8N144 294 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 ANO3Q9BYT9 981 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 CELF4Q9BZC1 486 aaKnown RBP10.04□□□□□ -0.8
PKP4-207ENST00000457109 UPF3BQ9BZI7 483 aaKnown RBP10.04□□□□□ -0.8
PKP4-207ENST00000457109 CLDND1Q9NY35 253 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 BARHL2Q9NY43 387 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 GINS2Q9Y248 185 aa10.04□□□□□ -0.8
PKP4-207ENST00000457109 LAMA4Q16363 1823 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 CHD9Q3L8U1 2897 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 SMIM35A0A1B0GVV1 85 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 DDX39AO00148 427 aaKnown RBP10.03□□□□□ -0.8
PKP4-207ENST00000457109 MEIS1O00470 390 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 ARP10275 920 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 KLRC1P26715 233 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 PSMA5P28066 241 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 CD52P31358 61 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 RCAN1P53805 252 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 TMEM62Q0P6H9 643 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 PLCB4Q15147 1175 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 TSGA10IPQ3SY00 556 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 NAALADL2Q58DX5 795 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 TCEAL5Q5H9L2 206 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 ZNF484Q5JVG2 852 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 MARCH8Q5T0T0 291 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 PDXDC2PQ6P474 469 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 BLOC1S2Q6QNY1 142 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 NIPA1Q7RTP0 329 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 NPAS4Q8IUM7 802 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 BICD2Q8TD16 824 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 MICAL1Q8TDZ2 1067 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 PABPC5Q96DU9 382 aaKnown RBP10.03□□□□□ -0.8
PKP4-207ENST00000457109 PGBD1Q96JS3 809 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 TCEANC2Q96MN5 208 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 ZNF577Q9BSK1 485 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 PLVAPQ9BX97 442 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 IGFLR1Q9H665 355 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 EPHX3Q9H6B9 360 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 AGO4Q9HCK5 861 aaKnown RBP10.03□□□□□ -0.8
PKP4-207ENST00000457109 ZNF302Q9NR11 478 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 AAASQ9NRG9 546 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 TBC1D22BQ9NU19 505 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 TELO2Q9Y4R8 837 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 SAMM50Q9Y512 469 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 PCDHB7Q9Y5E2 793 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 ADGRA3Q8IWK6 1321 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 CDH23Q9H251 3354 aa10.03□□□□□ -0.8
PKP4-207ENST00000457109 MYO9BQ13459 2157 aa10.02□□□□□ -0.8
PKP4-207ENST00000457109 DENND3A2RUS2 1198 aa10.02□□□□□ -0.81
PKP4-207ENST00000457109 GRXCR2A6NFK2 248 aa10.02□□□□□ -0.81
PKP4-207ENST00000457109 C5orf67F2Z3F1 127 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms