RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 NLRC4Q9NPP4 1024 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 SNX12Q9UMY4 172 aa20.26■□□□□ 0.83
SEMA3B-209ENST00000456560 IGLV3-22A0A075B6J6 115 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 TARSL2A2RTX5 802 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 CETN3O15182 167 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 SERPING1P05155 500 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 SFR1Q86XK3 245 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 GPIHBP1Q8IV16 184 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 SPICE1Q8N0Z3 855 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 SUGCTQ9HAC7 445 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 H3BQF6 201 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 ECE1P42892 770 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 GYS2P54840 703 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 GFPT1Q06210 699 aaPredicted RBP20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 CREG2Q8IUH2 290 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 KCTD17Q8N5Z5 321 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 JADE2Q9NQC1 790 aa20.25■□□□□ 0.83
SEMA3B-209ENST00000456560 UTRNP46939 3433 aa20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 PSME4Q14997 1843 aa20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 EML1O00423 815 aa20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 PPIP5K2O43314 1243 aa20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 CAPN2P17655 700 aa20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 POLR2FP61218 127 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 KNOP1Q1ED39 458 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 SLC9C1Q4G0N8 1177 aa20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 MUM1L1Q5H9M0 696 aa20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 ZNF572Q7Z3I7 529 aaPredicted RBP20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 EIF2AK1Q9BQI3 630 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 GANQ9H2C0 597 aa20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 SALL4Q9UJQ4 1053 aa20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 TMX2Q9Y320 296 aa20.24■□□□□ 0.83
SEMA3B-209ENST00000456560 EYA4O95677 639 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 NR2F2P24468 414 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 BMT2Q1RMZ1 405 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 DPY19L2P1Q6NXN4 242 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 FRMD5Q7Z6J6 570 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 ACER1Q8TDN7 264 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 CRACR2AQ9BSW2 395 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 ARHGEF10LQ9HCE6 1279 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 PPP1R1BQ9UD71 204 aaPredicted RBP20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 SMCHD1A6NHR9 2005 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 SPDYE2BA6NHP3 402 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 TCP10L2B9ZVM9 353 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 PDXKO00764 312 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 SPDYE6P0CI01 402 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 ZNF76P36508 570 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 STAT2P52630 851 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 APBA1Q02410 837 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 KCNH2Q12809 1159 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 TRAF1Q13077 416 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 CASP8Q14790 479 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 MTFR1LQ9H019 292 aa20.23■□□□□ 0.83
SEMA3B-209ENST00000456560 MYBP10242 640 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 MCM3P25205 808 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 RNF10Q8N5U6 811 aaKnown RBP20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 CAGE1Q8TC20 777 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 EXOC4Q96A65 974 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 HSD17B14Q9BPX1 270 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 RUSC1Q9BVN2 902 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 PDE11AQ9HCR9 933 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 AIPL1Q9NZN9 384 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 ADAM21Q9UKJ8 722 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 RASSF7Q02833 373 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 CYP4A11Q02928 519 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 ITIH3Q06033 890 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 TDRD12Q587J7 1177 aaKnown RBP20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 FAM151AQ8WW52 585 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 TBC1D5Q92609 795 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 ALS2CR12Q96Q35 445 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 WDR18Q9BV38 432 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 BHMT2Q9H2M3 363 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 TMOD2Q9NZR1 351 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 ZNF70Q9UC06 446 aaPredicted RBP20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 HDAC9Q9UKV0 1011 aa20.22■□□□□ 0.83
SEMA3B-209ENST00000456560 RSPH10B2B2RC85 870 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 CALUO43852 315 aaPredicted RBP20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 PRPF6O94906 941 aaKnown RBP20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 RSPH10BP0C881 870 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 ZSCAN26Q16670 478 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 RSBN1LQ6PCB5 846 aaPredicted RBP20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 OTOP1Q7RTM1 612 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 MMGT1Q8N4V1 131 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 COG1Q8WTW3 980 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 GMLQ99445 158 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 RGL1Q9NZL6 768 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 LMAN1P49257 510 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 IQCEQ6IPM2 695 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 OSBPL9Q96SU4 736 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 TSPYL1Q9H0U9 437 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 RANBP17Q9H2T7 1088 aaKnown RBP20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 GOPCQ9HD26 462 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 RABGAP1Q9Y3P9 1069 aa20.21■□□□□ 0.83
SEMA3B-209ENST00000456560 CNTNAP1P78357 1384 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 MYH10P35580 1976 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 C21orf2O43822 256 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 EIF3JO75822 258 aaKnown RBP20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 PSMD10O75832 226 aa20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 TCP1P17987 556 aaKnown RBP20.2■□□□□ 0.82
SEMA3B-209ENST00000456560 RINT1Q6NUQ1 792 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms