RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CEP120Q8N960 986 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 NCOA7Q8NI08 942 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 EPS8L3Q8TE67 593 aaKnown RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 KRT35Q92764 455 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ORAI2Q96SN7 254 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 TRIM9Q9C026 710 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 KRT82Q9NSB4 513 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 CHKBQ9Y259 395 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 CEP290O15078 2479 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 SHTN1A0MZ66 631 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 SMIM23A6NLE4 172 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ATP6V1G1O75348 118 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 CBX6O95503 412 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 CHN1P15882 459 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 TRIM21P19474 475 aaKnown RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 SP100P23497 879 aaPredicted RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ADD2P35612 726 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 LIFRP42702 1097 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 CES4AQ5XG92 561 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 TTC7BQ86TV6 843 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF276Q8N554 614 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 DDX17Q92841 729 aaKnown RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 CNKSR1Q969H4 720 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 PHF20Q9BVI0 1012 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 GRHL1Q9NZI5 618 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 CEP72Q9P209 647 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 WASF2Q9Y6W5 498 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 PES1O00541 588 aaKnown RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 PRLRP16471 622 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 MAGEA1P43355 309 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 KCNA1Q09470 495 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ZKSCAN8Q15776 578 aaPredicted RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 RC3H1Q5TC82 1133 aaKnown RBP4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 TRIM68Q6AZZ1 485 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 CENPPQ6IPU0 288 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 IRF2BP2Q7Z5L9 587 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 NCAPG2Q86XI2 1143 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 LCORLQ8N3X6 602 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 USP38Q8NB14 1042 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ERGIC2Q96RQ1 377 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 UBAC1Q9BSL1 405 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 BLOC1S4Q9NUP1 217 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 ATP8A1Q9Y2Q0 1164 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 DMXL1Q9Y485 3027 aa4.98□□□□□ -1.61
DEPDC1-202ENST00000456315 BCL9O00512 1426 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 TLDC2A0PJX2 215 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 NUTM2BA6NNL0 878 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 NUTM2EB1AL46 878 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 GFPT2O94808 682 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 CNGA1P29973 690 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 PAPOLAP51003 745 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 PAK1Q13153 545 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 PDIA5Q14554 519 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 CTC1Q2NKJ3 1217 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ALS2CLQ60I27 953 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 PPP4R3AQ6IN85 833 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 CRELD2Q6UXH1 353 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 PIK3AP1Q6ZUJ8 805 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 RRAGAQ7L523 313 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 TRPM8Q7Z2W7 1104 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 STAG2Q8N3U4 1231 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 C1orf131Q8NDD1 294 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 NGDNQ8NEJ9 315 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 AGBL1Q96MI9 1066 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 PHF12Q96QT6 1004 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 GALNT8Q9NY28 637 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 HOOK1Q9UJC3 728 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 STK38LQ9Y2H1 464 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 FMN2Q9NZ56 1722 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 PFASO15067 1338 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 MYOCOSA0A1B0GUC4 107 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 A6NJR5 290 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 FMNL1O95466 1100 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 RPN1P04843 607 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 GBP2P32456 591 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 HOXD13P35453 343 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 EMP3P54852 163 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 TMEM67Q5HYA8 995 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 CWF19L1Q69YN2 538 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 FNBP4Q8N3X1 1017 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 MIGA1Q8NAN2 632 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 TEKT4Q8WW24 435 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 FAM84AQ96KN4 292 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 DNAJC17Q9NVM6 304 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 DLGAP2Q9P1A6 1054 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 RIC1Q4ADV7 1423 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 SOS2Q07890 1332 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 CCDC88AQ3V6T2 1871 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 TMEM2Q9UHN6 1383 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 TMX2-CTNND1H3BSU7 103 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 O00370 1275 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 IDH1O75874 414 aaKnown RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 CASP5P51878 434 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 KLRC3Q07444 240 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 KIF5AQ12840 1032 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ZNF211Q13398 564 aaPredicted RBP4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 TXNRD1Q16881 649 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 RILPL1Q5EBL4 403 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 MEI1Q5TIA1 1274 aa4.97□□□□□ -1.61
DEPDC1-202ENST00000456315 ATG14Q6ZNE5 492 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms