RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 CTSHP09668 335 aa24.12■■□□□ 1.45
HMGB3-205ENST00000455596 STAT5BP51692 787 aa24.12■■□□□ 1.45
HMGB3-205ENST00000455596 SCRN1Q12765 414 aa24.12■■□□□ 1.45
HMGB3-205ENST00000455596 ANKRD1Q15327 319 aa24.12■■□□□ 1.45
HMGB3-205ENST00000455596 TCTN1Q2MV58 587 aa24.12■■□□□ 1.45
HMGB3-205ENST00000455596 TAF2Q6P1X5 1199 aa24.12■■□□□ 1.45
HMGB3-205ENST00000455596 PLPPR4Q7Z2D5 763 aa24.12■■□□□ 1.45
HMGB3-205ENST00000455596 ZNF577Q9BSK1 485 aa24.12■■□□□ 1.45
HMGB3-205ENST00000455596 PRDM12Q9H4Q4 367 aa24.12■■□□□ 1.45
HMGB3-205ENST00000455596 TUBE1Q9UJT0 475 aa24.12■■□□□ 1.45
HMGB3-205ENST00000455596 RRN3P2A6NIE6 340 aa24.11■■□□□ 1.45
HMGB3-205ENST00000455596 CDKL5O76039 1030 aa24.11■■□□□ 1.45
HMGB3-205ENST00000455596 CIITAP33076 1130 aa24.11■■□□□ 1.45
HMGB3-205ENST00000455596 TBC1D22BQ9NU19 505 aa24.11■■□□□ 1.45
HMGB3-205ENST00000455596 TPCN1Q9ULQ1 816 aa24.11■■□□□ 1.45
HMGB3-205ENST00000455596 PCDHA4Q9UN74 947 aa24.11■■□□□ 1.45
HMGB3-205ENST00000455596 TRPC6Q9Y210 931 aa24.11■■□□□ 1.45
HMGB3-205ENST00000455596 COL6A3P12111 3177 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 CCNE2O96020 404 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 CA3P07451 260 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 IGBP1P78318 339 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 DEFB103AP81534 67 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 PRR16Q569H4 304 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 PLEKHG4Q58EX7 1191 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 FAM26DQ5JW98 314 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 RPAINQ86UA6 219 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 RSPH3Q86UC2 560 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 FAM177A1Q8N128 213 aaPredicted RBP24.1■■□□□ 1.45
HMGB3-205ENST00000455596 DBF4BQ8NFT6 615 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 IL17RAQ96F46 866 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 C22orf23Q9BZE7 217 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 EVPLQ92817 2033 aa24.1■■□□□ 1.45
HMGB3-205ENST00000455596 IGKV6D-21A0A0A0MT36 114 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 MBLAC1A4D2B0 266 aaPredicted RBP24.09■■□□□ 1.45
HMGB3-205ENST00000455596 DHX15O43143 795 aaKnown RBP24.09■■□□□ 1.45
HMGB3-205ENST00000455596 TLL1O43897 1013 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 PFKFB2O60825 505 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 INSRRP14616 1297 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 SLC26A2P50443 739 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 USP11P51784 963 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 AK2P54819 239 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 PLCB4Q15147 1175 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 MARCH8Q5T0T0 291 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 FAM160B1Q5W0V3 765 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 ABHD15Q6UXT9 468 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 RUFY4Q6ZNE9 571 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 BLIDQ8IZY5 108 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 UIMC1Q96RL1 719 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 TCEAL9Q9UHQ7 104 aa24.09■■□□□ 1.45
HMGB3-205ENST00000455596 BACH1O14867 736 aa24.08■■□□□ 1.45
HMGB3-205ENST00000455596 GALNT17Q6IS24 598 aa24.08■■□□□ 1.45
HMGB3-205ENST00000455596 MIS18BP1Q6P0N0 1132 aa24.08■■□□□ 1.45
HMGB3-205ENST00000455596 DAGLBQ8NCG7 672 aa24.08■■□□□ 1.45
HMGB3-205ENST00000455596 SEPT8Q92599 483 aa24.08■■□□□ 1.45
HMGB3-205ENST00000455596 AIFM3Q96NN9 605 aa24.08■■□□□ 1.45
HMGB3-205ENST00000455596 ZBED2Q9BTP6 218 aa24.08■■□□□ 1.45
HMGB3-205ENST00000455596 STK36Q9NRP7 1315 aa24.08■■□□□ 1.44
HMGB3-205ENST00000455596 POTEB3A0JP26 581 aa24.07■■□□□ 1.44
HMGB3-205ENST00000455596 RPLP2P05387 115 aaKnown RBP24.07■■□□□ 1.44
HMGB3-205ENST00000455596 ZNF746Q6NUN9 644 aaPredicted RBP24.07■■□□□ 1.44
HMGB3-205ENST00000455596 POTEBQ6S5H4 581 aa24.07■■□□□ 1.44
HMGB3-205ENST00000455596 TBCKQ8TEA7 893 aa24.07■■□□□ 1.44
HMGB3-205ENST00000455596 DNAJB3Q8WWF6 145 aa24.07■■□□□ 1.44
HMGB3-205ENST00000455596 ZNF302Q9NR11 478 aa24.07■■□□□ 1.44
HMGB3-205ENST00000455596 CHRNA1P02708 482 aa24.06■■□□□ 1.44
HMGB3-205ENST00000455596 KRT76Q01546 638 aa24.06■■□□□ 1.44
HMGB3-205ENST00000455596 TMCO2Q7Z6W1 182 aaPredicted RBP24.06■■□□□ 1.44
HMGB3-205ENST00000455596 CCDC60Q8IWA6 550 aaPredicted RBP24.06■■□□□ 1.44
HMGB3-205ENST00000455596 SMAP1Q8IYB5 467 aaPredicted RBP24.06■■□□□ 1.44
HMGB3-205ENST00000455596 APBB2Q92870 758 aa24.06■■□□□ 1.44
HMGB3-205ENST00000455596 LENG9Q96B70 501 aa24.06■■□□□ 1.44
HMGB3-205ENST00000455596 OSBPL7Q9BZF2 842 aa24.06■■□□□ 1.44
HMGB3-205ENST00000455596 COL4A4P53420 1690 aaPredicted RBP24.05■■□□□ 1.44
HMGB3-205ENST00000455596 RBAK-RBAKDNI3L0D1 243 aa24.05■■□□□ 1.44
HMGB3-205ENST00000455596 M0R2N6 131 aa24.05■■□□□ 1.44
HMGB3-205ENST00000455596 GJB5O95377 273 aa24.05■■□□□ 1.44
HMGB3-205ENST00000455596 SEC24BO95487 1268 aa24.05■■□□□ 1.44
HMGB3-205ENST00000455596 AMHP03971 560 aa24.05■■□□□ 1.44
HMGB3-205ENST00000455596 XBP1P17861 261 aa24.05■■□□□ 1.44
HMGB3-205ENST00000455596 MGAT3Q09327 533 aa24.05■■□□□ 1.44
HMGB3-205ENST00000455596 MKRN4PQ13434 485 aaPredicted RBP24.05■■□□□ 1.44
HMGB3-205ENST00000455596 SWSAP1Q6NVH7 229 aa24.05■■□□□ 1.44
HMGB3-205ENST00000455596 PDXDC2PQ6P474 469 aa24.05■■□□□ 1.44
HMGB3-205ENST00000455596 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.05■■□□□ 1.44
HMGB3-205ENST00000455596 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.05■■□□□ 1.44
HMGB3-205ENST00000455596 EDIL3O43854 480 aa24.04■■□□□ 1.44
HMGB3-205ENST00000455596 HBP1O60381 514 aa24.04■■□□□ 1.44
HMGB3-205ENST00000455596 IGFBP4P22692 258 aa24.04■■□□□ 1.44
HMGB3-205ENST00000455596 TAP1Q03518 808 aa24.04■■□□□ 1.44
HMGB3-205ENST00000455596 NPY5RQ15761 445 aa24.04■■□□□ 1.44
HMGB3-205ENST00000455596 TRAPPC12Q8WVT3 735 aa24.04■■□□□ 1.44
HMGB3-205ENST00000455596 ZBTB10Q96DT7 871 aa24.04■■□□□ 1.44
HMGB3-205ENST00000455596 PHF20Q9BVI0 1012 aa24.04■■□□□ 1.44
HMGB3-205ENST00000455596 IFIH1Q9BYX4 1025 aaKnown RBP24.04■■□□□ 1.44
HMGB3-205ENST00000455596 PCDHA2Q9Y5H9 948 aa24.04■■□□□ 1.44
HMGB3-205ENST00000455596 COL1A2P08123 1366 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 CDH23Q9H251 3354 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 NLRC5Q86WI3 1866 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 MSH4O15457 936 aa24.03■■□□□ 1.44
HMGB3-205ENST00000455596 PSAPP07602 524 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms