RNA–Protein interactions for RNA: ENST00000455548.2

SMPD4-214, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-214ENST00000455548 ADAM17P78536 824 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 HMGN5P82970 282 aaKnown RBP18.41■□□□□ 0.54
SMPD4-214ENST00000455548 SMAD3P84022 425 aaKnown RBP18.41■□□□□ 0.54
SMPD4-214ENST00000455548 PPFIA1Q13136 1202 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 RASIP1Q5U651 963 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 MIS18BP1Q6P0N0 1132 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 DEFB128Q7Z7B8 93 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 SMAP1Q8IYB5 467 aaPredicted RBP18.41■□□□□ 0.54
SMPD4-214ENST00000455548 LMBR1Q8WVP7 490 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 MBOAT7Q96N66 472 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 RIT2Q99578 217 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 NAP1L4Q99733 375 aaKnown RBP18.41■□□□□ 0.54
SMPD4-214ENST00000455548 GTF3C3Q9Y5Q9 886 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 WDR81Q562E7 1941 aa18.41■□□□□ 0.54
SMPD4-214ENST00000455548 TET1Q8NFU7 2136 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 RRN3P2A6NIE6 340 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 MSH4O15457 936 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 GAS7O60861 476 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 CAND2O75155 1236 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 TDP2O95551 362 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 MMP1P03956 469 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 ACTN1P12814 892 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 GRIK4Q16099 956 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 NEK8Q86SG6 692 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 OXER1Q8TDS5 423 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 SLC5A5Q92911 643 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 UIMC1Q96RL1 719 aa18.4■□□□□ 0.54
SMPD4-214ENST00000455548 FTOQ9C0B1 505 aaKnown RBP eCLIP18.4■□□□□ 0.54
SMPD4-214ENST00000455548 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.39■□□□□ 0.53
SMPD4-214ENST00000455548 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.39■□□□□ 0.53
SMPD4-214ENST00000455548 WDR64B1ANS9 1081 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 PSAPP07602 524 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 THPOP40225 353 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 PLCB4Q15147 1175 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 LETM2Q2VYF4 491 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 ZNF618Q5T7W0 954 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 LRCH2Q5VUJ6 765 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 KRT40Q6A162 431 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 PIK3AP1Q6ZUJ8 805 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 OTOP2Q7RTS6 562 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 WNT8BQ93098 351 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 VWCEQ96DN2 955 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 TEKT3Q9BXF9 490 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 ZNF302Q9NR11 478 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 DDX25Q9UHL0 483 aaKnown RBP18.39■□□□□ 0.53
SMPD4-214ENST00000455548 TRPC6Q9Y210 931 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 PCDHA10Q9Y5I2 948 aa18.39■□□□□ 0.53
SMPD4-214ENST00000455548 POTEB3A0JP26 581 aa18.38■□□□□ 0.53
SMPD4-214ENST00000455548 INSRRP14616 1297 aa18.38■□□□□ 0.53
SMPD4-214ENST00000455548 NR5A1Q13285 461 aa18.38■□□□□ 0.53
SMPD4-214ENST00000455548 SAFBQ15424 915 aaKnown RBP eCLIP18.38■□□□□ 0.53
SMPD4-214ENST00000455548 FAM109BQ6ICB4 259 aaPredicted RBP18.38■□□□□ 0.53
SMPD4-214ENST00000455548 PPP4R3AQ6IN85 833 aa18.38■□□□□ 0.53
SMPD4-214ENST00000455548 TAF2Q6P1X5 1199 aa18.38■□□□□ 0.53
SMPD4-214ENST00000455548 PDXDC2PQ6P474 469 aa18.38■□□□□ 0.53
SMPD4-214ENST00000455548 POTEBQ6S5H4 581 aa18.38■□□□□ 0.53
SMPD4-214ENST00000455548 CCDC60Q8IWA6 550 aaPredicted RBP18.38■□□□□ 0.53
SMPD4-214ENST00000455548 DIS3L2Q8IYB7 885 aaKnown RBP18.38■□□□□ 0.53
SMPD4-214ENST00000455548 TUBE1Q9UJT0 475 aa18.38■□□□□ 0.53
SMPD4-214ENST00000455548 SAMM50Q9Y512 469 aa18.38■□□□□ 0.53
SMPD4-214ENST00000455548 MBLAC1A4D2B0 266 aaPredicted RBP18.37■□□□□ 0.53
SMPD4-214ENST00000455548 ZBBXA8MT70 800 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 RSPH10B2B2RC85 870 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 HBP1O60381 514 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 PSMD10O75832 226 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 CXCL10P02778 98 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 RPLP2P05387 115 aaKnown RBP18.37■□□□□ 0.53
SMPD4-214ENST00000455548 RSPH10BP0C881 870 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 SFNP31947 248 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 MCM2P49736 904 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 JAK3P52333 1124 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 FOSBP53539 338 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 SWSAP1Q6NVH7 229 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 TRAF7Q6Q0C0 670 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 RSPH3Q86UC2 560 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 RDM1Q8NG50 284 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 ETNPPLQ8TBG4 499 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 TNFRSF25Q93038 417 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 C8orf76Q96K31 380 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 BACH2Q9BYV9 841 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 DISC1Q9NRI5 854 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 CXXC1Q9P0U4 656 aaPredicted RBP18.37■□□□□ 0.53
SMPD4-214ENST00000455548 SLC4A7Q9Y6M7 1214 aa18.37■□□□□ 0.53
SMPD4-214ENST00000455548 CCNT1O60563 726 aaKnown RBP18.36■□□□□ 0.53
SMPD4-214ENST00000455548 IGBP1P78318 339 aa18.36■□□□□ 0.53
SMPD4-214ENST00000455548 MARCH8Q5T0T0 291 aa18.36■□□□□ 0.53
SMPD4-214ENST00000455548 RPAINQ86UA6 219 aa18.36■□□□□ 0.53
SMPD4-214ENST00000455548 CKAP2LQ8IYA6 745 aa18.36■□□□□ 0.53
SMPD4-214ENST00000455548 FAM184AQ8NB25 1140 aa18.36■□□□□ 0.53
SMPD4-214ENST00000455548 ATP8B4Q8TF62 1192 aa18.36■□□□□ 0.53
SMPD4-214ENST00000455548 FAM20AQ96MK3 541 aa18.36■□□□□ 0.53
SMPD4-214ENST00000455548 KIF3AQ9Y496 699 aa18.36■□□□□ 0.53
SMPD4-214ENST00000455548 MAFBQ9Y5Q3 323 aaPredicted RBP18.36■□□□□ 0.53
SMPD4-214ENST00000455548 COL1A2P08123 1366 aa18.35■□□□□ 0.53
SMPD4-214ENST00000455548 BTBD18B2RXH4 712 aa18.35■□□□□ 0.53
SMPD4-214ENST00000455548 SLC37A4O43826 429 aa18.35■□□□□ 0.53
SMPD4-214ENST00000455548 NBNO60934 754 aa18.35■□□□□ 0.53
SMPD4-214ENST00000455548 BAIAP3O94812 1187 aa18.35■□□□□ 0.53
SMPD4-214ENST00000455548 GPNMBQ14956 572 aa18.35■□□□□ 0.53
SMPD4-214ENST00000455548 EARS2Q5JPH6 523 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms