RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 UBIAD1Q9Y5Z9 338 aa21.48■■□□□ 1.03
MSH6-206ENST00000455383 MMP1P03956 469 aa21.47■■□□□ 1.03
MSH6-206ENST00000455383 CAMK1Q14012 370 aa21.47■■□□□ 1.03
MSH6-206ENST00000455383 TSHZ1Q6ZSZ6 1077 aa21.47■■□□□ 1.03
MSH6-206ENST00000455383 SRBD1Q8N5C6 995 aaKnown RBP21.47■■□□□ 1.03
MSH6-206ENST00000455383 DNAJB3Q8WWF6 145 aa21.47■■□□□ 1.03
MSH6-206ENST00000455383 LINC01599Q8WXQ3 324 aa21.47■■□□□ 1.03
MSH6-206ENST00000455383 SMARCAD1Q9H4L7 1026 aa21.47■■□□□ 1.03
MSH6-206ENST00000455383 SEC63Q9UGP8 760 aaKnown RBP21.47■■□□□ 1.03
MSH6-206ENST00000455383 CDY2AQ9Y6F7 541 aa21.47■■□□□ 1.03
MSH6-206ENST00000455383 SQORQ9Y6N5 450 aa21.47■■□□□ 1.03
MSH6-206ENST00000455383 MBTPS2O43462 519 aa21.46■■□□□ 1.03
MSH6-206ENST00000455383 PLEKHA8P1O95397 391 aa21.46■■□□□ 1.03
MSH6-206ENST00000455383 IRS1P35568 1242 aa21.46■■□□□ 1.03
MSH6-206ENST00000455383 GNAQP50148 359 aa21.46■■□□□ 1.03
MSH6-206ENST00000455383 BTG3Q14201 252 aaPredicted RBP21.46■■□□□ 1.03
MSH6-206ENST00000455383 CSPP1Q1MSJ5 1256 aa21.46■■□□□ 1.03
MSH6-206ENST00000455383 RTN4RL1Q86UN2 441 aaPredicted RBP21.46■■□□□ 1.03
MSH6-206ENST00000455383 KCNH6Q9H252 994 aa21.46■■□□□ 1.03
MSH6-206ENST00000455383 PSTPIP2Q9H939 334 aa21.46■■□□□ 1.03
MSH6-206ENST00000455383 AGO3Q9H9G7 860 aaKnown RBP21.46■■□□□ 1.03
MSH6-206ENST00000455383 JADE2Q9NQC1 790 aa21.46■■□□□ 1.03
MSH6-206ENST00000455383 MAFGO15525 162 aa21.45■■□□□ 1.02
MSH6-206ENST00000455383 RPLP2P05387 115 aaKnown RBP21.45■■□□□ 1.02
MSH6-206ENST00000455383 MARK3P27448 753 aa21.45■■□□□ 1.02
MSH6-206ENST00000455383 MRPS6P82932 125 aaKnown RBP21.45■■□□□ 1.02
MSH6-206ENST00000455383 MTMR1Q13613 665 aa21.45■■□□□ 1.02
MSH6-206ENST00000455383 P2RX5Q93086 422 aa21.45■■□□□ 1.02
MSH6-206ENST00000455383 PCYT2Q99447 389 aa21.45■■□□□ 1.02
MSH6-206ENST00000455383 UPF3BQ9BZI7 483 aaKnown RBP21.45■■□□□ 1.02
MSH6-206ENST00000455383 PLAGL2Q9UPG8 496 aa21.45■■□□□ 1.02
MSH6-206ENST00000455383 RRN3P2A6NIE6 340 aa21.44■■□□□ 1.02
MSH6-206ENST00000455383 TBX10O75333 385 aa21.44■■□□□ 1.02
MSH6-206ENST00000455383 ADAM15Q13444 863 aa21.44■■□□□ 1.02
MSH6-206ENST00000455383 SMAD4Q13485 552 aaKnown RBP21.44■■□□□ 1.02
MSH6-206ENST00000455383 NAALADL2Q58DX5 795 aa21.44■■□□□ 1.02
MSH6-206ENST00000455383 TMTC2Q8N394 836 aa21.44■■□□□ 1.02
MSH6-206ENST00000455383 GLG1Q92896 1179 aa21.44■■□□□ 1.02
MSH6-206ENST00000455383 UIMC1Q96RL1 719 aa21.44■■□□□ 1.02
MSH6-206ENST00000455383 RBM8AQ9Y5S9 174 aaKnown RBP21.44■■□□□ 1.02
MSH6-206ENST00000455383 SH2B2O14492 632 aaPredicted RBP21.43■■□□□ 1.02
MSH6-206ENST00000455383 INSRRP14616 1297 aa21.43■■□□□ 1.02
MSH6-206ENST00000455383 CD52P31358 61 aa21.43■■□□□ 1.02
MSH6-206ENST00000455383 GTF2F1P35269 517 aaKnown RBP eCLIP21.43■■□□□ 1.022e-7■■■■■ 27.6
MSH6-206ENST00000455383 IER5Q5VY09 327 aa21.43■■□□□ 1.02
MSH6-206ENST00000455383 ALYREFQ86V81 257 aaKnown RBP21.43■■□□□ 1.02
MSH6-206ENST00000455383 CMTR2Q8IYT2 770 aaKnown RBP21.43■■□□□ 1.02
MSH6-206ENST00000455383 POP1Q99575 1024 aaKnown RBP21.43■■□□□ 1.02
MSH6-206ENST00000455383 FTHL17Q9BXU8 183 aa21.43■■□□□ 1.02
MSH6-206ENST00000455383 MRPL42Q9Y6G3 142 aaKnown RBP21.43■■□□□ 1.02
MSH6-206ENST00000455383 LINC01565O15544 149 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 PRC1O43663 620 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 DNAJB1P25685 340 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 CLUL1Q15846 466 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 UBE2SQ16763 222 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 HERC4Q5GLZ8 1057 aaPredicted RBP21.42■■□□□ 1.02
MSH6-206ENST00000455383 CASC1Q6TDU7 716 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 NPAS4Q8IUM7 802 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 CMTR1Q8N1G2 835 aaKnown RBP21.42■■□□□ 1.02
MSH6-206ENST00000455383 ZBTB10Q96DT7 871 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 TMEM87BQ96K49 555 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 MSLNLQ96KJ4 702 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 ALG13Q9NP73 1137 aaKnown RBP21.42■■□□□ 1.02
MSH6-206ENST00000455383 PCDHA6Q9UN73 950 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 PCDHA8Q9Y5H6 950 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 PCDHA2Q9Y5H9 948 aa21.42■■□□□ 1.02
MSH6-206ENST00000455383 EYA4O95677 639 aa21.41■■□□□ 1.02
MSH6-206ENST00000455383 ITGB1P05556 798 aa21.41■■□□□ 1.02
MSH6-206ENST00000455383 IGBP1P78318 339 aa21.41■■□□□ 1.02
MSH6-206ENST00000455383 COL9A3Q14050 684 aaPredicted RBP21.41■■□□□ 1.02
MSH6-206ENST00000455383 SPPL3Q8TCT6 385 aa21.41■■□□□ 1.02
MSH6-206ENST00000455383 FBXL18Q96ME1 805 aa21.41■■□□□ 1.02
MSH6-206ENST00000455383 JPH1Q9HDC5 661 aaPredicted RBP21.41■■□□□ 1.02
MSH6-206ENST00000455383 PKD2L1Q9P0L9 805 aa21.41■■□□□ 1.02
MSH6-206ENST00000455383 CD207Q9UJ71 328 aa21.41■■□□□ 1.02
MSH6-206ENST00000455383 TRPV2Q9Y5S1 764 aa21.41■■□□□ 1.02
MSH6-206ENST00000455383 IGSF9BQ9UPX0 1349 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 KDM3AQ9Y4C1 1321 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 SPDYE3A6NKU9 549 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 CALM1P0DP23 149 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 CALM2P0DP24 149 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 CALM3P0DP25 149 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 MCM5P33992 734 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 LIFRP42702 1097 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 NHLH1Q02575 133 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 HFE2Q6ZVN8 426 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 RNF135Q8IUD6 432 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 TNPO1Q92973 898 aaKnown RBP21.4■■□□□ 1.02
MSH6-206ENST00000455383 FAM49AQ9H0Q0 323 aaPredicted RBP21.4■■□□□ 1.02
MSH6-206ENST00000455383 IGFLR1Q9H665 355 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 SLC9A2Q9UBY0 812 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 PADI3Q9ULW8 664 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 C5orf42Q9H799 3197 aa21.4■■□□□ 1.02
MSH6-206ENST00000455383 KIAA1671Q9BY89 1806 aa21.39■■□□□ 1.02
MSH6-206ENST00000455383 ZNF318Q5VUA4 2279 aa21.39■■□□□ 1.02
MSH6-206ENST00000455383 NFASCO94856 1347 aa21.39■■□□□ 1.01
MSH6-206ENST00000455383 CCDC69A6NI79 296 aa21.39■■□□□ 1.01
MSH6-206ENST00000455383 RXRAP19793 462 aa21.39■■□□□ 1.01
MSH6-206ENST00000455383 PLCB4Q15147 1175 aa21.39■■□□□ 1.01
MSH6-206ENST00000455383 NFXL1Q6ZNB6 911 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms