RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 UPF3AQ9H1J1 476 aaKnown RBP18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 CCDC39Q9UFE4 941 aa18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 IGSF9BQ9UPX0 1349 aa18.6■□□□□ 0.57
CCDC90B-202ENST00000455220 POTEB3A0JP26 581 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 A6NJR5 290 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 DYNC1LI2O43237 492 aaPredicted RBP18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 LGR5O75473 907 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 RARBP10826 455 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 TCF7P36402 384 aaPredicted RBP18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 SYKP43405 635 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 QARSP47897 775 aaKnown RBP18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 CYP4A11Q02928 519 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 E2F4Q16254 413 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 SLC9C1Q4G0N8 1177 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 POTEBQ6S5H4 581 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 CCDC60Q8IWA6 550 aaPredicted RBP18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 AFAP1L1Q8TED9 768 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 PCYT2Q99447 389 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 LXNQ9BS40 222 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 HMX1Q9NP08 348 aaPredicted RBP18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 PRDM10Q9NQV6 1147 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 DDX20Q9UHI6 824 aaKnown RBP18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 EMSYQ7Z589 1322 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 POLR2DO15514 142 aaKnown RBP18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 MSCO60682 206 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 NR1I2O75469 434 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 LYPLA2O95372 231 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 MMP3P08254 477 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 PLCG1P19174 1290 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 GJA9P57773 515 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 PSMC5P62195 406 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 CTTNQ14247 550 aaKnown RBP18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 UGCGQ16739 394 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 NAALADL2Q58DX5 795 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 PDILTQ8N807 584 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 BANK1Q8NDB2 785 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 AP5M1Q9H0R1 490 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 ZSWIM4Q9H7M6 989 aa18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 WRAP73Q9P2S5 460 aaPredicted RBP18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 MAFBQ9Y5Q3 323 aaPredicted RBP18.59■□□□□ 0.57
CCDC90B-202ENST00000455220 MYH9P35579 1960 aaKnown RBP18.58■□□□□ 0.57
CCDC90B-202ENST00000455220 CTAGE5O15320 804 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 PPFIA4O75335 1185 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 ZNF202O95125 648 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 SWSAP1Q6NVH7 229 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 POTEGQ6S5H5 508 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 C4orf19Q8IY42 314 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 IQUBQ8NA54 791 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 RASSF8Q8NHQ8 419 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 LRRC15Q8TF66 581 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 ATP6V0A1Q93050 837 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 CDK5RAP3Q96JB5 506 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 PANK2Q9BZ23 570 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 GABBR1Q9UBS5 961 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 SYNRGQ9UMZ2 1314 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 KIAA1024Q9UPX6 916 aa18.58■□□□□ 0.56
CCDC90B-202ENST00000455220 DKC1O60832 514 aaKnown RBP eCLIP18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 ADAMTS4O75173 837 aa18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 CPT1AP50416 773 aa18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 ZRSR1Q15695 479 aaKnown RBP18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 RRAGBQ5VZM2 374 aa18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 FAM160B1Q5W0V3 765 aa18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 PLPPR4Q7Z2D5 763 aa18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 TPH2Q8IWU9 490 aa18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 ZNF302Q9NR11 478 aa18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 DDX19AQ9NUU7 478 aaKnown RBP18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 DACT1Q9NYF0 836 aa18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 STK17AQ9UEE5 414 aa18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 USP25Q9UHP3 1055 aa18.57■□□□□ 0.56
CCDC90B-202ENST00000455220 BACH1O14867 736 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 ACTN4O43707 911 aaKnown RBP18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 ZNF862O60290 1169 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 LGALS2P05162 132 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 STAT6P42226 847 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 DGKDQ16760 1214 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 KLHL40Q2TBA0 621 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 LHX8Q68G74 356 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 KCNK18Q7Z418 384 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 DHX58Q96C10 678 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 TIGD1Q96MW7 591 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 PLIN2Q99541 437 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 CUEDC2Q9H467 287 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 XPNPEP3Q9NQH7 507 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 BLOC1S4Q9NUP1 217 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 FRMPD3Q5JV73 1810 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 LOXHD1Q8IVV2 1947 aa18.56■□□□□ 0.56
CCDC90B-202ENST00000455220 STBD1O95210 358 aa18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 SLFN14P0C7P3 912 aa18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 ATP4AP20648 1035 aa18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 CST5P28325 142 aaPredicted RBP18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 STAT5BP51692 787 aa18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 FSCN1Q16658 493 aaKnown RBP18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 LONRF3Q496Y0 759 aa18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 BRDTQ58F21 947 aaPredicted RBP18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 PDXDC2PQ6P474 469 aa18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 ARMC5Q96C12 935 aa18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 NACC1Q96RE7 527 aa18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 UNC93B1Q9H1C4 597 aa18.55■□□□□ 0.56
CCDC90B-202ENST00000455220 SMARCAD1Q9H4L7 1026 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms